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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180041041
LLBZ010037046
369742
Alphaproteobacteria
TTC
Glu
>WENV180041307
LLBZ010091197
88860
Alphaproteobacteria
TAA
Leu
>WENV180040713
LLBZ010008500
160318
Alphaproteobacteria
CCT
Arg
>WENV180041437
LLBZ010133746
158950
Alphaproteobacteria
TCT
Arg
>WENV180040841
LLBZ010016904
202767
Alphaproteobacteria
GTG
His
>WENV180040629
LLBZ010002958
160320
Alphaproteobacteria
CCG
Arg
>WENV180041389
LLBZ010117100
166628
Alphaproteobacteria
CAT
Met
>WENV180041075
LLBZ010040430
259905
Alphaproteobacteria
CCA
Trp
>WENV180041255
LLBZ010076243
369566
Alphaproteobacteria
GGT
Thr
>WENV180040628
LLBZ010002867
448412
Alphaproteobacteria
CTG
Gln
>WENV180040737
LLBZ010009862
88859
Alphaproteobacteria
GTA
Tyr
>WENV180041109
LLBZ010045213
173083
Alphaproteobacteria
CCT
Arg
>WENV180040739
LLBZ010009998
162756
Alphaproteobacteria
>WENV180040741
LLBZ010010250
395582
Alphaproteobacteria
CTC
Glu
>WENV180040913
LLBZ010023505
461210
Alphaproteobacteria
CTG
Gln
>WENV180041004
LLBZ010033269
377113
Alphaproteobacteria
GAC
Val
>WENV180040653
LLBZ010004597
272272
Alphaproteobacteria
TAC
Val
>WENV180040789
LLBZ010014703
308418
Alphaproteobacteria
TTT
Lys
>WENV180041959
LLBZ010801972
115561
Alphaproteobacteria
TAA
Leu
>WENV180041178
LLBZ010059016
126543
Alphaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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