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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180041152
LLBZ010053577
237606
Bacteroidota
GCC
Gly
>WENV180041091
LLBZ010043201
415980
Bacteroidota
TTG
Gln
>WENV180040618
LLBZ010002535
338625
Bacteroidota
TTC
Glu
>WENV180040762
LLBZ010012831
127458
Bacteroidota
GAC
Val
>WENV180040632
LLBZ010003053
60611
Bacteroidota
GCT
Ser
>WENV180040953
LLBZ010027653
161616
Bacteroidota
CAT
Met
>WENV180041402
LLBZ010123724
241469
Bacteroidota
GAA
Phe
>WENV180041036
LLBZ010036462
241469
Bacteroidota
GAA
Phe
>WENV180041015
LLBZ010034565
241469
Bacteroidota
GAA
Phe
>WENV180041063
LLBZ010039476
239858
Bacteroidota
TTT
Lys
>WENV180041062
LLBZ010039476
239858
Bacteroidota
TTT
Lys
>WENV180040617
LLBZ010002535
347983
Bacteroidota
TTC
Glu
>WENV180040799
LLBZ010015283
150103
Bacteroidota
GTG
His
>WENV180041776
LLBZ010459742
285949
Bacteroidota
GCC
Gly
>WENV180041248
LLBZ010074656
285949
Bacteroidota
GCC
Gly
>WENV180041467
LLBZ010145486
412189
Bacteroidota
CCA
Trp
>WENV180041133
LLBZ010049799
412189
Bacteroidota
CCA
Trp
>WENV180041724
LLBZ010347005
413186
Bacteroidota
>WENV180040679
LLBZ010006016
44938
Bacteroidota
TGA
Ser
>WENV180040730
LLBZ010009593
152147
Bacteroidota
TCT
Arg
>WENV180040623
LLBZ010002768
235802
Bacteroidota
CAT
Met
>WENV180041285
LLBZ010085334
150454
Bacteroidota
TGT
Thr
>WENV180041284
LLBZ010085334
150454
Bacteroidota
TGT
Thr
>WENV180041131
LLBZ010049799
150454
Bacteroidota
TGT
Thr
>WENV180041132
LLBZ010049799
113694
Bacteroidota
GTA
Tyr
>WENV180040576
LLBZ010001160
113694
Bacteroidota
GTA
Tyr
>WENV180040977
LLBZ010031061
302196
Bacteroidota
TTT
Lys
>WENV180040976
LLBZ010031061
302196
Bacteroidota
TTT
Lys
>WENV180041726
LLBZ010348143
200537
Bacteroidota
TCG
Arg
>WENV180041348
LLBZ010102467
49675
Bacteroidota
TGA
Ser
>WENV180041037
LLBZ010036462
37199
Bacteroidota
TAA
Leu
>WENV180040616
LLBZ010002504
148047
Bacteroidota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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