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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180040576
LLBZ010001160
128709
Bacteroidota
GTA
Tyr
>WENV180040616
LLBZ010002504
160350
Bacteroidota
CAT
Met
>WENV180040623
LLBZ010002768
314601
Bacteroidota
>WENV180040638
LLBZ010003497
131028
Bacteroidota
CAA
Leu
>WENV180040654
LLBZ010004824
301008
Bacteroidota
TTG
Gln
>WENV180040656
LLBZ010004913
51241
Bacteroidota
GAG
Leu
>WENV180040662
LLBZ010005281
448581
Bacteroidota
GCA
Cys
>WENV180040679
LLBZ010006016
57357
Bacteroidota
TGA
Ser
>WENV180040729
LLBZ010009593
138865
Bacteroidota
>WENV180040730
LLBZ010009593
167465
Bacteroidota
TCT
Arg
>WENV180040762
LLBZ010012831
139231
Bacteroidota
GAC
Val
>WENV180040768
LLBZ010013591
450733
Bacteroidota
GCA
Cys
>WENV180040799
LLBZ010015283
171792
Bacteroidota
GTG
His
>WENV180040935
LLBZ010025722
169173
Bacteroidota
TCG
Arg
>WENV180040942
LLBZ010026576
213750
Bacteroidota
GTT
Asn
>WENV180040943
LLBZ010026576
376218
Bacteroidota
CCT
Arg
>WENV180040944
LLBZ010026578
131282
Bacteroidota
CAA
Leu
>WENV180040953
LLBZ010027653
163118
Bacteroidota
CAT
Met
>WENV180040976
LLBZ010031061
259007
Bacteroidota
TTT
Lys
>WENV180040977
LLBZ010031061
259007
Bacteroidota
TTT
Lys
>WENV180041015
LLBZ010034565
268445
Bacteroidota
GAA
Phe
>WENV180041034
LLBZ010036399
373542
Bacteroidota
GGT
Thr
>WENV180041035
LLBZ010036399
310118
Bacteroidota
CCA
Trp
>WENV180041036
LLBZ010036462
268445
Bacteroidota
GAA
Phe
>WENV180041037
LLBZ010036462
41177
Bacteroidota
TAA
Leu
>WENV180041062
LLBZ010039476
257181
Bacteroidota
TTT
Lys
>WENV180041063
LLBZ010039476
257181
Bacteroidota
TTT
Lys
>WENV180041078
LLBZ010041046
190788
Bacteroidota
GGG
Pro
>WENV180041091
LLBZ010043201
451823
Bacteroidota
TTG
Gln
>WENV180041132
LLBZ010049799
128709
Bacteroidota
GTA
Tyr
>WENV180041133
LLBZ010049799
448064
Bacteroidota
CCA
Trp
>WENV180041135
LLBZ010050043
208924
Bacteroidota
GGC
Ala
>WENV180041153
LLBZ010053577
44188
Bacteroidota
TAA
Leu
>WENV180041170
LLBZ010057172
370977
Bacteroidota
TTC
Glu
>WENV180041187
LLBZ010061172
285909
Bacteroidota
CTT
Lys
>WENV180041197
LLBZ010062086
200745
Bacteroidota
TCG
Arg
>WENV180041287
LLBZ010085934
389826
Bacteroidota
CCA
Trp
>WENV180041348
LLBZ010102467
57026
Bacteroidota
TGA
Ser
>WENV180041353
LLBZ010103772
466605
Bacteroidota
CCA
Trp
>WENV180041402
LLBZ010123724
268445
Bacteroidota
GAA
Phe
>WENV180041467
LLBZ010145486
448064
Bacteroidota
CCA
Trp
>WENV180041468
LLBZ010147407
260877
Bacteroidota
CCC
Gly
>WENV180041469
LLBZ010148590
138865
Bacteroidota
>WENV180041541
LLBZ010176464
26218
Bacteroidota
GGA
Ser
>WENV180041724
LLBZ010347005
448062
Bacteroidota
>WENV180041726
LLBZ010348143
217219
Bacteroidota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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