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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170736628
LULM01012748
37198
Actinomycetota
GAG
Leu
>WENV170736245
LULM01000380
25937
Actinomycetota
CGA
Ser
>WENV170736690
LULM01017905
239151
Actinomycetota
GGC
Ala
>WENV170736295
LULM01000799
45451
Actinomycetota
GGA
Ser
>WENV170736839
LULM01039782
146916
Actinomycetota
CGG
Pro
>WENV170736288
LULM01000710
267252
Actinomycetota
GGT
Thr
>WENV170736280
LULM01000641
162292
Actinomycetota
GGG
Pro
>WENV170736865
LULM01043609
4672
Actinomycetota
GCT
Ser
>WENV170736356
LULM01001576
389344
Actinomycetota
CCG
Arg
>WENV170736225
LULM01000237
146745
Actinomycetota
TGG
Pro
>WENV170736211
LULM01000137
121525
Actinomycetota
TTG
Gln
>WENV170736271
LULM01000589
243392
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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