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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170738412
LULP01000145
338269
Alphaproteobacteria
GTT
Asn
>WENV170738404
LULP01000122
412259
Alphaproteobacteria
CTG
Gln
>WENV170738994
LULP01012109
237493
Alphaproteobacteria
CCA
Trp
>WENV170739102
LULP01021438
339737
Alphaproteobacteria
GAC
Val
>WENV170738350
LULP01000021
58865
Alphaproteobacteria
GAG
Leu
>WENV170739162
LULP01029814
412917
Alphaproteobacteria
TCC
Gly
>WENV170738333
LULP01000003
147152
Alphaproteobacteria
ACG
Arg
>WENV170738879
LULP01006039
113700
Alphaproteobacteria
>WENV170738374
LULP01000070
237197
Alphaproteobacteria
CCA
Trp
>WENV170738590
LULP01001059
338282
Alphaproteobacteria
GTT
Asn
>WENV170738430
LULP01000213
95928
Alphaproteobacteria
TAG
Leu
>WENV170739000
LULP01012797
339454
Alphaproteobacteria
>WENV170738649
LULP01001529
412260
Alphaproteobacteria
TCC
Gly
>WENV170738327
LULP01000002
236004
Alphaproteobacteria
TTT
Lys
>WENV170738402
LULP01000111
339639
Alphaproteobacteria
TTG
Gln
>WENV170738334
LULP01000003
95925
Alphaproteobacteria
CAA
Leu
>WENV170739108
LULP01022330
147289
Alphaproteobacteria
GTC
Asp
>WENV170738359
LULP01000035
59202
Alphaproteobacteria
TAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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