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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170757275
LUMQ01000531
113700
Alphaproteobacteria
>WENV170757557
LUMQ01003438
113700
Alphaproteobacteria
>WENV170757826
LUMQ01011420
339454
Alphaproteobacteria
>WENV170757210
LUMQ01000243
147089
Alphaproteobacteria
ACG
Arg
>WENV170757938
LUMQ01018960
167926
Alphaproteobacteria
CAT
Met
>WENV170757844
LUMQ01012248
268365
Alphaproteobacteria
CCA
Trp
>WENV170757294
LUMQ01000622
268365
Alphaproteobacteria
CCA
Trp
>WENV170757478
LUMQ01002207
147088
Alphaproteobacteria
CCT
Arg
>WENV170757700
LUMQ01006872
348781
Alphaproteobacteria
GAA
Phe
>WENV170757647
LUMQ01004981
345376
Alphaproteobacteria
GAC
Val
>WENV170757624
LUMQ01004553
359842
Alphaproteobacteria
GAC
Val
>WENV170757251
LUMQ01000390
359842
Alphaproteobacteria
GAC
Val
>WENV170757488
LUMQ01002346
23468
Alphaproteobacteria
GCT
Ser
>WENV170757425
LUMQ01001501
23561
Alphaproteobacteria
GGA
Ser
>WENV170757162
LUMQ01000085
163860
Alphaproteobacteria
GGG
Pro
>WENV170757786
LUMQ01009355
176908
Alphaproteobacteria
GTC
Asp
>WENV170757848
LUMQ01012694
150356
Alphaproteobacteria
GTC
Asp
>WENV170757604
LUMQ01004149
161002
Alphaproteobacteria
GTG
His
>WENV170757274
LUMQ01000531
161002
Alphaproteobacteria
GTG
His
>WENV170757727
LUMQ01007374
338282
Alphaproteobacteria
GTT
Asn
>WENV170757927
LUMQ01018271
412424
Alphaproteobacteria
TCC
Gly
>WENV170757846
LUMQ01012415
412424
Alphaproteobacteria
TCC
Gly
>WENV170757283
LUMQ01000548
412424
Alphaproteobacteria
TCC
Gly
>WENV170757642
LUMQ01004894
242540
Alphaproteobacteria
TGC
Ala
>WENV170757429
LUMQ01001526
252148
Alphaproteobacteria
TGT
Thr
>WENV170757169
LUMQ01000090
339722
Alphaproteobacteria
TTG
Gln
>WENV170758006
LUMQ01025277
266073
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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