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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170757280
LUMQ01000542
366531
Cyanobacteriota
TTG
Gln
>WENV170757853
LUMQ01013098
366531
Cyanobacteriota
TTG
Gln
>WENV170757205
LUMQ01000232
145761
Cyanobacteriota
GTC
Asp
>WENV170757213
LUMQ01000254
145761
Cyanobacteriota
GTC
Asp
>WENV170757682
LUMQ01006417
164907
Cyanobacteriota
GGG
Pro
>WENV170757179
LUMQ01000130
339686
Cyanobacteriota
TAC
Val
>WENV170757282
LUMQ01000547
37357
Cyanobacteriota
TAA
Leu
>WENV170757301
LUMQ01000648
96363
Cyanobacteriota
TAG
Leu
>WENV170757145
LUMQ01000045
25356
Cyanobacteriota
GGA
Ser
>WENV170757173
LUMQ01000115
339690
Cyanobacteriota
TGT
Thr
>WENV170757752
LUMQ01008076
149253
Cyanobacteriota
ACG
Arg
>WENV170757113
LUMQ01000011
23668
Cyanobacteriota
TGA
Ser
>WENV170757541
LUMQ01003119
363933
Cyanobacteriota
GTT
Asn
>WENV170757353
LUMQ01000927
363933
Cyanobacteriota
GTT
Asn
>WENV170757212
LUMQ01000254
237899
Cyanobacteriota
CCA
Trp
>WENV170757783
LUMQ01009115
23971
Cyanobacteriota
TGA
Ser
>WENV170757570
LUMQ01003712
23971
Cyanobacteriota
TGA
Ser
>WENV170757510
LUMQ01002674
23971
Cyanobacteriota
TGA
Ser
>WENV170757350
LUMQ01000885
411836
Cyanobacteriota
TCC
Gly
>WENV170757154
LUMQ01000066
339688
Cyanobacteriota
GAC
Val
>WENV170757175
LUMQ01000120
162346
Cyanobacteriota
GGG
Pro
>WENV170757751
LUMQ01008053
252089
Cyanobacteriota
GTG
His
>WENV170757099
LUMQ01000004
252089
Cyanobacteriota
GTG
His
>WENV170757098
LUMQ01000004
80908
Cyanobacteriota
CAA
Leu
>WENV170757791
LUMQ01009579
11030
Cyanobacteriota
GCT
Ser
>WENV170757102
LUMQ01000006
11030
Cyanobacteriota
GCT
Ser
>WENV170757186
LUMQ01000158
37223
Cyanobacteriota
TAA
Leu
>WENV170757658
LUMQ01005264
240100
Cyanobacteriota
CAT
Met
>WENV170757300
LUMQ01000640
95762
Cyanobacteriota
AAG
Leu
>WENV170757577
LUMQ01003779
275577
Cyanobacteriota
TGC
Ala
>WENV170757105
LUMQ01000006
147238
Cyanobacteriota
CCG
Arg
>WENV170758085
LUMQ01034170
341034
Cyanobacteriota
GGT
Thr
>WENV170758013
LUMQ01026129
341034
Cyanobacteriota
GGT
Thr
>WENV170757915
LUMQ01017478
341034
Cyanobacteriota
GGT
Thr
>WENV170757873
LUMQ01014514
341034
Cyanobacteriota
GGT
Thr
>WENV170757440
LUMQ01001726
341034
Cyanobacteriota
GGT
Thr
>WENV170757766
LUMQ01008429
145893
Cyanobacteriota
CAT
Met
>WENV170757204
LUMQ01000232
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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