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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170759718
LUMT01000269
366531
Cyanobacteriota
TTG
Gln
>WENV170759687
LUMT01000166
145761
Cyanobacteriota
GTC
Asp
>WENV170760532
LUMT01022855
164907
Cyanobacteriota
GGG
Pro
>WENV170759815
LUMT01000586
37357
Cyanobacteriota
TAA
Leu
>WENV170759975
LUMT01001561
96363
Cyanobacteriota
TAG
Leu
>WENV170760503
LUMT01020055
25356
Cyanobacteriota
GGA
Ser
>WENV170760452
LUMT01017285
339690
Cyanobacteriota
TGT
Thr
>WENV170759985
LUMT01001667
149253
Cyanobacteriota
ACG
Arg
>WENV170760600
LUMT01028668
363933
Cyanobacteriota
GTT
Asn
>WENV170760208
LUMT01006072
23971
Cyanobacteriota
TGA
Ser
>WENV170759776
LUMT01000446
411836
Cyanobacteriota
TCC
Gly
>WENV170760174
LUMT01005048
339688
Cyanobacteriota
GAC
Val
>WENV170760583
LUMT01026730
162346
Cyanobacteriota
GGG
Pro
>WENV170760507
LUMT01020739
252089
Cyanobacteriota
GTG
His
>WENV170759982
LUMT01001643
252089
Cyanobacteriota
GTG
His
>WENV170760305
LUMT01009147
11030
Cyanobacteriota
GCT
Ser
>WENV170759805
LUMT01000547
240100
Cyanobacteriota
CAT
Met
>WENV170759746
LUMT01000338
95762
Cyanobacteriota
AAG
Leu
>WENV170759992
LUMT01001743
275577
Cyanobacteriota
TGC
Ala
>WENV170760350
LUMT01011006
68425
Cyanobacteriota
CAG
Leu
>WENV170760001
LUMT01001868
145893
Cyanobacteriota
CAT
Met
>WENV170759686
LUMT01000166
275071
Cyanobacteriota
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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