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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170782972
MAAC01012278
253656
Campylobacterota
CCA
Trp
>WENV170781785
MAAC01000414
161529
Campylobacterota
CAT
Met
>WENV170781789
MAAC01000414
161529
Campylobacterota
CAT
Met
>WENV170782014
MAAC01006227
161529
Campylobacterota
CAT
Met
>WENV170782976
MAAC01012363
161529
Campylobacterota
CAT
Met
>WENV170782979
MAAC01012363
161529
Campylobacterota
CAT
Met
>WENV170782013
MAAC01006227
191925
Campylobacterota
GTC
Asp
>WENV170782973
MAAC01012291
191925
Campylobacterota
GTC
Asp
>WENV170782051
MAAC01007065
149512
Campylobacterota
GAT
Ile
>WENV170781783
MAAC01000414
149516
Campylobacterota
CAT
Met
>WENV170782977
MAAC01012363
149516
Campylobacterota
CAT
Met
>WENV170782983
MAAC01012511
250410
Campylobacterota
TTT
Lys
>WENV170782970
MAAC01012278
149518
Campylobacterota
TCC
Gly
>WENV170782965
MAAC01012273
149518
Campylobacterota
TCC
Gly
>WENV170782075
MAAC01008005
149518
Campylobacterota
TCC
Gly
>WENV170782978
MAAC01012363
154128
Campylobacterota
TGT
Thr
>WENV170782968
MAAC01012278
154128
Campylobacterota
TGT
Thr
>WENV170781784
MAAC01000414
154128
Campylobacterota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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