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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180107620
OAPH01000725
366531
Cyanobacteriota
TTG
Gln
>WENV180107614
OAPH01000625
109616
Cyanobacteriota
GTA
Tyr
>WENV180108737
OAPH01269586
267489
Cyanobacteriota
GGC
Ala
>WENV180107581
OAPH01000109
144929
Cyanobacteriota
CAT
Met
>WENV180107570
OAPH01000026
145761
Cyanobacteriota
GTC
Asp
>WENV180107670
OAPH01001674
145761
Cyanobacteriota
GTC
Asp
>WENV180107567
OAPH01000024
306125
Cyanobacteriota
GTG
His
>WENV180108200
OAPH01063889
306125
Cyanobacteriota
GTG
His
>WENV180108004
OAPH01028438
164907
Cyanobacteriota
GGG
Pro
>WENV180107925
OAPH01019582
339686
Cyanobacteriota
TAC
Val
>WENV180107596
OAPH01000237
339686
Cyanobacteriota
TAC
Val
>WENV180107603
OAPH01000331
37357
Cyanobacteriota
TAA
Leu
>WENV180107660
OAPH01001552
96363
Cyanobacteriota
TAG
Leu
>WENV180107590
OAPH01000193
25356
Cyanobacteriota
GGA
Ser
>WENV180108187
OAPH01061418
339690
Cyanobacteriota
TGT
Thr
>WENV180107563
OAPH01000021
339690
Cyanobacteriota
TGT
Thr
>WENV180107966
OAPH01024494
310428
Cyanobacteriota
TGC
Ala
>WENV180107639
OAPH01001011
149253
Cyanobacteriota
ACG
Arg
>WENV180107549
OAPH01000001
23668
Cyanobacteriota
TGA
Ser
>WENV180107758
OAPH01005813
23971
Cyanobacteriota
TGA
Ser
>WENV180107599
OAPH01000268
411836
Cyanobacteriota
TCC
Gly
>WENV180107608
OAPH01000386
305373
Cyanobacteriota
CGC
Ala
>WENV180107612
OAPH01000543
339688
Cyanobacteriota
GAC
Val
>WENV180107558
OAPH01000019
162346
Cyanobacteriota
GGG
Pro
>WENV180107566
OAPH01000024
80908
Cyanobacteriota
CAA
Leu
>WENV180107551
OAPH01000003
11030
Cyanobacteriota
GCT
Ser
>WENV180107634
OAPH01000973
37223
Cyanobacteriota
TAA
Leu
>WENV180107673
OAPH01001730
240100
Cyanobacteriota
CAT
Met
>WENV180107616
OAPH01000635
95762
Cyanobacteriota
AAG
Leu
>WENV180107862
OAPH01014287
188100
Cyanobacteriota
CCG
Arg
>WENV180107591
OAPH01000211
147238
Cyanobacteriota
CCG
Arg
>WENV180107615
OAPH01000625
341034
Cyanobacteriota
GGT
Thr
>WENV180107727
OAPH01003609
145893
Cyanobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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