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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180113183
OAPQ01008325
267922
Alphaproteobacteria
CCA
Trp
>WENV180113267
OAPQ01017036
113700
Alphaproteobacteria
>WENV180113357
OAPQ01042759
246184
Alphaproteobacteria
GAA
Phe
>WENV180113184
OAPQ01008482
338282
Alphaproteobacteria
GTT
Asn
>WENV180113193
OAPQ01009170
339846
Alphaproteobacteria
GAC
Val
>WENV180113160
OAPQ01005615
28682
Alphaproteobacteria
GGA
Ser
>WENV180113290
OAPQ01022753
161002
Alphaproteobacteria
GTG
His
>WENV180113129
OAPQ01003418
341164
Alphaproteobacteria
GCC
Gly
>WENV180113093
OAPQ01001636
359842
Alphaproteobacteria
GAC
Val
>WENV180113317
OAPQ01028937
370641
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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