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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180113000
OAPQ01000038
370165
Alphaproteobacteria
TTC
Glu
>WENV180113091
OAPQ01001567
275643
Alphaproteobacteria
TTT
Lys
>WENV180113183
OAPQ01008325
259585
Alphaproteobacteria
CCA
Trp
>WENV180113267
OAPQ01017036
125595
Alphaproteobacteria
>WENV180113098
OAPQ01001923
406362
Alphaproteobacteria
GAA
Phe
>WENV180112980
OAPQ01000004
263418
Alphaproteobacteria
TTT
Lys
>WENV180113507
OAPQ01131334
114680
Alphaproteobacteria
TAG
Leu
>WENV180113338
OAPQ01035691
76380
Alphaproteobacteria
GAG
Leu
>WENV180113093
OAPQ01001636
377113
Alphaproteobacteria
GAC
Val
>WENV180113160
OAPQ01005615
26205
Alphaproteobacteria
GGA
Ser
>WENV180113294
OAPQ01023564
163583
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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