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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
108 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180167831
OAVP01000495
235146
Actinomycetota
CGT
Thr
>WENV180167842
OAVP01000573
235347
Actinomycetota
GGC
Ala
>WENV180167843
OAVP01000573
235347
Actinomycetota
GGC
Ala
>WENV180167881
OAVP01000783
235347
Actinomycetota
GGC
Ala
>WENV180167882
OAVP01000783
235347
Actinomycetota
GGC
Ala
>WENV180168012
OAVP01002712
166493
Actinomycetota
CTT
Lys
>WENV180168011
OAVP01002608
235153
Actinomycetota
CCT
Arg
>WENV180167630
OAVP01000076
3239
Actinomycetota
GCT
Ser
>WENV180167665
OAVP01000123
144589
Actinomycetota
ACG
Arg
>WENV180167666
OAVP01000123
144589
Actinomycetota
ACG
Arg
>WENV180167635
OAVP01000077
37070
Actinomycetota
CGA
Ser
>WENV180167890
OAVP01000842
144600
Actinomycetota
TGG
Pro
>WENV180167921
OAVP01001088
235194
Actinomycetota
GTG
His
>WENV180167844
OAVP01000587
273786
Actinomycetota
CGT
Thr
>WENV180167829
OAVP01000495
273786
Actinomycetota
CGT
Thr
>WENV180167888
OAVP01000833
158720
Actinomycetota
ACG
Arg
>WENV180167764
OAVP01000279
158720
Actinomycetota
ACG
Arg
>WENV180167763
OAVP01000279
158720
Actinomycetota
ACG
Arg
>WENV180167928
OAVP01001242
245301
Actinomycetota
GCC
Gly
>WENV180167782
OAVP01000312
245301
Actinomycetota
GCC
Gly
>WENV180167780
OAVP01000312
245301
Actinomycetota
GCC
Gly
>WENV180167863
OAVP01000681
411601
Actinomycetota
CCC
Gly
>WENV180167879
OAVP01000757
144826
Actinomycetota
GGG
Pro
>WENV180167854
OAVP01000612
23370
Actinomycetota
GCT
Ser
>WENV180167797
OAVP01000359
23370
Actinomycetota
GCT
Ser
>WENV180167904
OAVP01000962
174149
Actinomycetota
GAT
Ile
>WENV180167658
OAVP01000113
174149
Actinomycetota
GAT
Ile
>WENV180167920
OAVP01001079
338239
Actinomycetota
TTC
Glu
>WENV180167749
OAVP01000261
338239
Actinomycetota
TTC
Glu
>WENV180167690
OAVP01000178
162208
Actinomycetota
TAC
Val
>WENV180167948
OAVP01001446
235174
Actinomycetota
TGC
Ala
>WENV180167905
OAVP01000962
235174
Actinomycetota
TGC
Ala
>WENV180167659
OAVP01000113
235174
Actinomycetota
TGC
Ala
>WENV180168025
OAVP01003407
235101
Actinomycetota
TTT
Lys
>WENV180167751
OAVP01000265
235101
Actinomycetota
TTT
Lys
>WENV180167577
OAVP01000035
235101
Actinomycetota
TTT
Lys
>WENV180167566
OAVP01000030
121510
Actinomycetota
TAA
Leu
>WENV180167773
OAVP01000309
356045
Actinomycetota
GAC
Val
>WENV180167730
OAVP01000236
356045
Actinomycetota
GAC
Val
>WENV180167835
OAVP01000522
153948
Actinomycetota
GGG
Pro
>WENV180167970
OAVP01001642
145345
Actinomycetota
TAC
Val
>WENV180167731
OAVP01000236
235199
Actinomycetota
CAC
Val
>WENV180167774
OAVP01000309
235199
Actinomycetota
CAC
Val
>WENV180167903
OAVP01000954
44862
Actinomycetota
CGA
Ser
>WENV180167576
OAVP01000035
367535
Actinomycetota
CTG
Gln
>WENV180167889
OAVP01000842
413665
Actinomycetota
TTG
Gln
>WENV180167880
OAVP01000783
413665
Actinomycetota
TTG
Gln
>WENV180167741
OAVP01000246
45154
Actinomycetota
TGA
Ser
>WENV180167837
OAVP01000530
254857
Actinomycetota
CCG
Arg
>WENV180167771
OAVP01000309
254857
Actinomycetota
CCG
Arg
>WENV180167753
OAVP01000267
254857
Actinomycetota
CCG
Arg
>WENV180167655
OAVP01000107
16223
Actinomycetota
GAG
Leu
>WENV180167796
OAVP01000359
144700
Actinomycetota
CAT
Met
>WENV180167636
OAVP01000077
44942
Actinomycetota
TGA
Ser
>WENV180167825
OAVP01000481
144636
Actinomycetota
GAT
Ile
>WENV180167823
OAVP01000481
144636
Actinomycetota
GAT
Ile
>WENV180167706
OAVP01000203
243671
Actinomycetota
CTC
Glu
>WENV180167575
OAVP01000035
243671
Actinomycetota
CTC
Glu
>WENV180167681
OAVP01000160
98279
Actinomycetota
GTA
Tyr
>WENV180167707
OAVP01000203
338148
Actinomycetota
CTG
Gln
>WENV180167983
OAVP01001952
235148
Actinomycetota
GTT
Asn
>WENV180167971
OAVP01001646
235148
Actinomycetota
GTT
Asn
>WENV180167927
OAVP01001218
235148
Actinomycetota
GTT
Asn
>WENV180167923
OAVP01001090
235148
Actinomycetota
GTT
Asn
>WENV180167685
OAVP01000166
235148
Actinomycetota
GTT
Asn
>WENV180167631
OAVP01000076
338238
Actinomycetota
CCA
Trp
>WENV180168021
OAVP01003082
176456
Actinomycetota
TCT
Arg
>WENV180167816
OAVP01000463
144825
Actinomycetota
CAT
Met
>WENV180167683
OAVP01000164
145347
Actinomycetota
CAA
Leu
>WENV180167832
OAVP01000510
412399
Actinomycetota
CCC
Gly
>WENV180168002
OAVP01002422
119508
Actinomycetota
TAA
Leu
>WENV180167739
OAVP01000244
338139
Actinomycetota
GTT
Asn
>WENV180167738
OAVP01000244
338139
Actinomycetota
GTT
Asn
>WENV180167855
OAVP01000627
235348
Actinomycetota
CCT
Arg
>WENV180167629
OAVP01000075
235348
Actinomycetota
CCT
Arg
>WENV180167917
OAVP01001064
16467
Actinomycetota
GCT
Ser
>WENV180167664
OAVP01000117
411554
Actinomycetota
CCC
Gly
>WENV180167845
OAVP01000587
113601
Actinomycetota
TAG
Leu
>WENV180167830
OAVP01000495
113601
Actinomycetota
TAG
Leu
>WENV180167670
OAVP01000133
113601
Actinomycetota
TAG
Leu
>WENV180167874
OAVP01000738
144595
Actinomycetota
CAA
Leu
>WENV180167593
OAVP01000050
145343
Actinomycetota
GGG
Pro
>WENV180167710
OAVP01000211
235149
Actinomycetota
CCT
Arg
>WENV180167701
OAVP01000195
414234
Actinomycetota
CTG
Gln
>WENV180167883
OAVP01000783
163764
Actinomycetota
TGG
Pro
>WENV180167813
OAVP01000449
145269
Actinomycetota
CAT
Met
>WENV180167669
OAVP01000133
235121
Actinomycetota
CGT
Thr
>WENV180167750
OAVP01000265
47164
Actinomycetota
GGA
Ser
>WENV180167574
OAVP01000035
47164
Actinomycetota
GGA
Ser
>WENV180167684
OAVP01000164
144635
Actinomycetota
TGG
Pro
>WENV180167597
OAVP01000057
61501
Actinomycetota
CAG
Leu
>WENV180167808
OAVP01000408
119485
Actinomycetota
TAA
Leu
>WENV180167943
OAVP01001400
45852
Actinomycetota
CGA
Ser
>WENV180167897
OAVP01000875
17009
Actinomycetota
GAG
Leu
>WENV180167647
OAVP01000089
17009
Actinomycetota
GAG
Leu
>WENV180167833
OAVP01000510
80622
Actinomycetota
CAG
Leu
>WENV180167787
OAVP01000337
80622
Actinomycetota
CAG
Leu
>WENV180167663
OAVP01000117
80622
Actinomycetota
CAG
Leu
>WENV180167564
OAVP01000028
158513
Actinomycetota
TGG
Pro
>WENV180167781
OAVP01000312
412834
Actinomycetota
GCA
Cys
>WENV180167949
OAVP01001446
235173
Actinomycetota
GGC
Ala
>WENV180167878
OAVP01000748
235173
Actinomycetota
GGC
Ala
>WENV180167964
OAVP01001553
243162
Actinomycetota
GTT
Asn
>WENV180167922
OAVP01001090
243162
Actinomycetota
GTT
Asn
>WENV180167648
OAVP01000091
144660
Actinomycetota
TAC
Val
>WENV180167795
OAVP01000359
95593
Actinomycetota
>WENV180167937
OAVP01001320
144823
Actinomycetota
TCT
Arg
>WENV180167657
OAVP01000110
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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