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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180167594
OAVP01000051
235097
Bacteroidota
TTT
Lys
>WENV180167724
OAVP01000227
235097
Bacteroidota
TTT
Lys
>WENV180167926
OAVP01001167
235097
Bacteroidota
TTT
Lys
>WENV180167538
OAVP01000014
235102
Bacteroidota
CGT
Thr
>WENV180167529
OAVP01000008
144657
Bacteroidota
CGG
Pro
>WENV180167803
OAVP01000392
338155
Bacteroidota
CTC
Glu
>WENV180167571
OAVP01000033
339341
Bacteroidota
GGT
Thr
>WENV180167711
OAVP01000213
343138
Bacteroidota
CCT
Arg
>WENV180167621
OAVP01000069
58715
Bacteroidota
GAG
Leu
>WENV180167801
OAVP01000389
338486
Bacteroidota
CAT
Met
>WENV180167586
OAVP01000045
338486
Bacteroidota
CAT
Met
>WENV180168047
OAVP01006421
415410
Bacteroidota
TTG
Gln
>WENV180167893
OAVP01000861
415410
Bacteroidota
TTG
Gln
>WENV180167875
OAVP01000742
415410
Bacteroidota
TTG
Gln
>WENV180167672
OAVP01000145
237247
Bacteroidota
TTT
Lys
>WENV180167733
OAVP01000237
338124
Bacteroidota
CCG
Arg
>WENV180167624
OAVP01000071
238121
Bacteroidota
CTT
Lys
>WENV180167623
OAVP01000071
238121
Bacteroidota
CTT
Lys
>WENV180167704
OAVP01000202
338132
Bacteroidota
GCA
Cys
>WENV180167700
OAVP01000193
338132
Bacteroidota
GCA
Cys
>WENV180167494
OAVP01000001
338132
Bacteroidota
GCA
Cys
>WENV180168160
OAVP01030135
193809
Bacteroidota
CAT
Met
>WENV180167715
OAVP01000216
144933
Bacteroidota
TCT
Arg
>WENV180167642
OAVP01000082
144933
Bacteroidota
TCT
Arg
>WENV180167567
OAVP01000031
144656
Bacteroidota
GTG
His
>WENV180167639
OAVP01000079
235207
Bacteroidota
CAT
Met
>WENV180167930
OAVP01001243
144596
Bacteroidota
GGC
Ala
>WENV180167776
OAVP01000310
80607
Bacteroidota
GTA
Tyr
>WENV180167768
OAVP01000298
80607
Bacteroidota
GTA
Tyr
>WENV180167582
OAVP01000042
80607
Bacteroidota
GTA
Tyr
>WENV180167792
OAVP01000345
113604
Bacteroidota
>WENV180167789
OAVP01000345
113604
Bacteroidota
>WENV180167894
OAVP01000864
16999
Bacteroidota
GGA
Ser
>WENV180167584
OAVP01000044
80614
Bacteroidota
>WENV180167573
OAVP01000034
80614
Bacteroidota
>WENV180167570
OAVP01000033
80614
Bacteroidota
>WENV180167537
OAVP01000012
144590
Bacteroidota
GTT
Asn
>WENV180167536
OAVP01000012
144590
Bacteroidota
GTT
Asn
>WENV180167622
OAVP01000070
95559
Bacteroidota
TAG
Leu
>WENV180167560
OAVP01000025
419272
Bacteroidota
CTG
Gln
>WENV180167533
OAVP01000010
95875
Bacteroidota
TAG
Leu
>WENV180167587
OAVP01000048
240012
Bacteroidota
CCC
Gly
>WENV180167535
OAVP01000012
44852
Bacteroidota
TAA
Leu
>WENV180167777
OAVP01000310
338165
Bacteroidota
GGT
Thr
>WENV180167960
OAVP01001513
19528
Bacteroidota
GGA
Ser
>WENV180167994
OAVP01002139
50727
Bacteroidota
TGA
Ser
>WENV180167896
OAVP01000872
50727
Bacteroidota
TGA
Ser
>WENV180167815
OAVP01000459
50727
Bacteroidota
TGA
Ser
>WENV180167723
OAVP01000224
50727
Bacteroidota
TGA
Ser
>WENV180167562
OAVP01000025
132360
Bacteroidota
GGG
Pro
>WENV180167939
OAVP01001342
425638
Bacteroidota
CTG
Gln
>WENV180167766
OAVP01000292
425638
Bacteroidota
CTG
Gln
>WENV180167585
OAVP01000044
185921
Bacteroidota
GTC
Asp
>WENV180167558
OAVP01000024
185921
Bacteroidota
GTC
Asp
>WENV180167802
OAVP01000392
23696
Bacteroidota
GCT
Ser
>WENV180167568
OAVP01000031
16224
Bacteroidota
GGA
Ser
>WENV180167561
OAVP01000025
16220
Bacteroidota
GGA
Ser
>WENV180167698
OAVP01000190
235129
Bacteroidota
GCC
Gly
>WENV180167696
OAVP01000190
235129
Bacteroidota
GCC
Gly
>WENV180167619
OAVP01000069
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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