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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180193548
OAZW01000941
24650
Bacillota
TAA
Leu
>WENV180193474
OAZW01000703
339630
Bacillota
GCC
Gly
>WENV180193165
OAZW01000175
37213
Bacillota
TGA
Ser
>WENV180193843
OAZW01021217
37213
Bacillota
TGA
Ser
>WENV180193651
OAZW01001582
144612
Bacillota
TCT
Arg
>WENV180193762
OAZW01007394
237286
Bacillota
CTT
Lys
>WENV180193837
OAZW01019291
243119
Bacillota
CTT
Lys
>WENV180193356
OAZW01000427
340802
Bacillota
TTG
Gln
>WENV180193546
OAZW01000941
144668
Bacillota
GTC
Asp
>WENV180192997
OAZW01000058
144668
Bacillota
GTC
Asp
>WENV180192872
OAZW01000002
44859
Bacillota
AAG
Leu
>WENV180193791
OAZW01009049
150517
Bacillota
CAT
Met
>WENV180193758
OAZW01007127
235079
Bacillota
GAA
Phe
>WENV180193836
OAZW01019291
144766
Bacillota
CAT
Met
>WENV180193759
OAZW01007127
240017
Bacillota
GCC
Gly
>WENV180193639
OAZW01001470
411584
Bacillota
TCC
Gly
>WENV180193834
OAZW01018584
341777
Bacillota
TTC
Glu
>WENV180193357
OAZW01000427
235127
Bacillota
TTT
Lys
>WENV180193003
OAZW01000058
235127
Bacillota
TTT
Lys
>WENV180193354
OAZW01000427
147674
Bacillota
TCT
Arg
>WENV180193640
OAZW01001470
235288
Bacillota
TAC
Val
>WENV180193792
OAZW01009564
342936
Bacillota
CCT
Arg
>WENV180193701
OAZW01002852
148495
Bacillota
TCT
Arg
>WENV180193392
OAZW01000484
243098
Bacillota
GGT
Thr
>WENV180193846
OAZW01023801
144762
Bacillota
TCT
Arg
>WENV180193801
OAZW01011914
237681
Bacillota
GTC
Asp
>WENV180193491
OAZW01000719
344240
Bacillota
GCC
Gly
>WENV180193305
OAZW01000332
344240
Bacillota
GCC
Gly
>WENV180193078
OAZW01000090
344240
Bacillota
GCC
Gly
>WENV180193728
OAZW01003713
238857
Bacillota
CCA
Trp
>WENV180193490
OAZW01000719
245344
Bacillota
GAA
Phe
>WENV180193487
OAZW01000710
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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