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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180226956
OBBT01000057
147158
Actinomycetota
TTT
Lys
>WENV180226958
OBBT01000057
147155
Actinomycetota
GTC
Asp
>WENV180226937
OBBT01000039
237816
Actinomycetota
GGT
Thr
>WENV180226911
OBBT01000021
304559
Actinomycetota
GCC
Gly
>WENV180226960
OBBT01000063
37209
Actinomycetota
GAG
Leu
>WENV180226907
OBBT01000020
147157
Actinomycetota
TAC
Val
>WENV180226974
OBBT01000094
80900
Actinomycetota
TGA
Ser
>WENV180226913
OBBT01000021
339641
Actinomycetota
GAC
Val
>WENV180226954
OBBT01000053
428901
Actinomycetota
CCC
Gly
>WENV180226908
OBBT01000020
339640
Actinomycetota
CTG
Gln
>WENV180226976
OBBT01000094
289966
Actinomycetota
ACG
Arg
>WENV180226931
OBBT01000035
237815
Actinomycetota
CTT
Lys
>WENV180226903
OBBT01000019
237808
Actinomycetota
TGC
Ala
>WENV180226995
OBBT01000119
80899
Actinomycetota
CAG
Leu
>WENV180226959
OBBT01000057
147156
Actinomycetota
GAA
Phe
>WENV180226966
OBBT01000086
432565
Actinomycetota
TCC
Gly
>WENV180226888
OBBT01000015
237804
Actinomycetota
TGT
Thr
>WENV180226938
OBBT01000039
338489
Actinomycetota
CAT
Met
>WENV180226887
OBBT01000015
237803
Actinomycetota
CGT
Thr
>WENV180226909
OBBT01000020
237812
Actinomycetota
CTC
Glu
>WENV180226977
OBBT01000094
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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