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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180303234
OBJF01021216
235146
Actinomycetota
CGT
Thr
>WENV180302312
OBJF01001295
119475
Actinomycetota
TAA
Leu
>WENV180303670
OBJF01082247
235347
Actinomycetota
GGC
Ala
>WENV180302927
OBJF01007721
235153
Actinomycetota
CCT
Arg
>WENV180302391
OBJF01001572
144589
Actinomycetota
ACG
Arg
>WENV180302392
OBJF01001572
144589
Actinomycetota
ACG
Arg
>WENV180302771
OBJF01004638
37070
Actinomycetota
CGA
Ser
>WENV180303516
OBJF01052069
144600
Actinomycetota
TGG
Pro
>WENV180303030
OBJF01010637
235092
Actinomycetota
CCG
Arg
>WENV180303858
OBJF01144703
245301
Actinomycetota
GCC
Gly
>WENV180303681
OBJF01083252
411601
Actinomycetota
CCC
Gly
>WENV180302276
OBJF01001063
16219
Actinomycetota
GCT
Ser
>WENV180302900
OBJF01007295
235174
Actinomycetota
TGC
Ala
>WENV180302528
OBJF01002373
235101
Actinomycetota
TTT
Lys
>WENV180303099
OBJF01013020
144625
Actinomycetota
GTC
Asp
>WENV180302519
OBJF01002323
144625
Actinomycetota
GTC
Asp
>WENV180303586
OBJF01063280
153948
Actinomycetota
GGG
Pro
>WENV180303561
OBJF01059104
44855
Actinomycetota
TGA
Ser
>WENV180303340
OBJF01030611
44862
Actinomycetota
CGA
Ser
>WENV180303008
OBJF01009690
198659
Actinomycetota
TAC
Val
>WENV180302541
OBJF01002504
16223
Actinomycetota
GAG
Leu
>WENV180302396
OBJF01001603
144593
Actinomycetota
TAT
Ile
>WENV180303543
OBJF01056239
144636
Actinomycetota
GAT
Ile
>WENV180302987
OBJF01009104
98279
Actinomycetota
GTA
Tyr
>WENV180302873
OBJF01006688
338148
Actinomycetota
CTG
Gln
>WENV180303068
OBJF01012117
235148
Actinomycetota
GTT
Asn
>WENV180302767
OBJF01004610
235148
Actinomycetota
GTT
Asn
>WENV180303171
OBJF01016193
53078
Actinomycetota
GGA
Ser
>WENV180303637
OBJF01073342
176456
Actinomycetota
TCT
Arg
>WENV180303686
OBJF01084017
144825
Actinomycetota
CAT
Met
>WENV180303621
OBJF01070367
338139
Actinomycetota
GTT
Asn
>WENV180302438
OBJF01001819
411554
Actinomycetota
CCC
Gly
>WENV180303097
OBJF01012982
113601
Actinomycetota
TAG
Leu
>WENV180302606
OBJF01002992
144595
Actinomycetota
CAA
Leu
>WENV180302583
OBJF01002787
145343
Actinomycetota
GGG
Pro
>WENV180302710
OBJF01004038
235149
Actinomycetota
CCT
Arg
>WENV180302772
OBJF01004647
91808
Actinomycetota
CAG
Leu
>WENV180303096
OBJF01012982
235121
Actinomycetota
CGT
Thr
>WENV180303098
OBJF01013020
393408
Actinomycetota
TTC
Glu
>WENV180302607
OBJF01002992
144635
Actinomycetota
TGG
Pro
>WENV180303209
OBJF01019111
44851
Actinomycetota
TGA
Ser
>WENV180303370
OBJF01033888
158513
Actinomycetota
TGG
Pro
>WENV180303857
OBJF01144703
412834
Actinomycetota
GCA
Cys
>WENV180302856
OBJF01006399
235173
Actinomycetota
GGC
Ala
>WENV180303457
OBJF01044128
243162
Actinomycetota
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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