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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180405721
OBTM01099300
196621
Bacillota
GTC
Asp
>WENV180405427
OBTM01006303
250201
Bacillota
TGC
Ala
>WENV180405633
OBTM01052863
338544
Bacillota
TGT
Thr
>WENV180405753
OBTM01115226
37549
Bacillota
TAA
Leu
>WENV180405558
OBTM01031958
307003
Bacillota
TGC
Ala
>WENV180405536
OBTM01026233
59312
Bacillota
CAG
Leu
>WENV180405500
OBTM01016366
193585
Bacillota
CGG
Pro
>WENV180405530
OBTM01024045
154766
Bacillota
GTC
Asp
>WENV180405634
OBTM01052863
97943
Bacillota
GTA
Tyr
>WENV180405587
OBTM01039719
338147
Bacillota
CTC
Glu
>WENV180405598
OBTM01043317
293599
Bacillota
CTT
Lys
>WENV180405631
OBTM01052806
152459
Bacillota
GTC
Asp
>WENV180405659
OBTM01059693
237265
Bacillota
TAC
Val
>WENV180405606
OBTM01045397
235114
Bacillota
TTT
Lys
>WENV180405729
OBTM01103264
302152
Bacillota
CTT
Lys
>WENV180405584
OBTM01037307
44859
Bacillota
AAG
Leu
>WENV180405735
OBTM01106965
342736
Bacillota
TTG
Gln
>WENV180405540
OBTM01026781
235079
Bacillota
GAA
Phe
>WENV180405367
OBTM01002979
296878
Bacillota
GTT
Asn
>WENV180405429
OBTM01006388
199366
Bacillota
CAT
Met
>WENV180405556
OBTM01031918
152513
Bacillota
GAC
Val
>WENV180405655
OBTM01057717
338149
Bacillota
CTC
Glu
>WENV180405741
OBTM01108762
245298
Bacillota
CGG
Pro
>WENV180405630
OBTM01052806
81644
Bacillota
GAG
Leu
>WENV180405428
OBTM01006388
81373
Bacillota
GTA
Tyr
>WENV180405538
OBTM01026781
235078
Bacillota
TAC
Val
>WENV180405632
OBTM01052863
263765
Bacillota
TAC
Val
>WENV180405664
OBTM01063398
300148
Bacillota
TAC
Val
>WENV180405369
OBTM01002979
248683
Bacillota
TTT
Lys
>WENV180405722
OBTM01099300
235095
Bacillota
GGT
Thr
>WENV180405368
OBTM01002979
344183
Bacillota
CTG
Gln
>WENV180405370
OBTM01002979
304759
Bacillota
TAC
Val
>WENV180405430
OBTM01006397
286963
Bacillota
CTT
Lys
>WENV180405471
OBTM01012106
152051
Bacillota
ACG
Arg
>WENV180405467
OBTM01011691
298620
Bacillota
CAT
Met
>WENV180405599
OBTM01043566
241526
Bacillota
CTT
Lys
>WENV180405723
OBTM01100345
338129
Bacillota
TGT
Thr
>WENV180405717
OBTM01098536
157838
Bacillota
GTC
Asp
>WENV180405686
OBTM01072195
144621
Bacillota
GTT
Asn
>WENV180405605
OBTM01045397
235113
Bacillota
GAA
Phe
>WENV180405688
OBTM01074568
95563
Bacillota
GTA
Tyr
>WENV180405378
OBTM01003130
338127
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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