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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180422853
OBVV01002044
235146
Actinomycetota
CGT
Thr
>WENV180422904
OBVV01003339
119475
Actinomycetota
TAA
Leu
>WENV180422915
OBVV01003569
235347
Actinomycetota
GGC
Ala
>WENV180422916
OBVV01003569
235347
Actinomycetota
GGC
Ala
>WENV180423007
OBVV01006116
166493
Actinomycetota
CTT
Lys
>WENV180422920
OBVV01003815
144589
Actinomycetota
ACG
Arg
>WENV180422921
OBVV01003815
144589
Actinomycetota
ACG
Arg
>WENV180423034
OBVV01007022
37070
Actinomycetota
CGA
Ser
>WENV180423118
OBVV01015568
144600
Actinomycetota
TGG
Pro
>WENV180423081
OBVV01008755
235092
Actinomycetota
CCG
Arg
>WENV180423018
OBVV01006317
235194
Actinomycetota
GTG
His
>WENV180422906
OBVV01003381
273786
Actinomycetota
CGT
Thr
>WENV180422892
OBVV01002990
158720
Actinomycetota
ACG
Arg
>WENV180422891
OBVV01002990
158720
Actinomycetota
ACG
Arg
>WENV180423067
OBVV01008224
411601
Actinomycetota
CCC
Gly
>WENV180422896
OBVV01003096
144826
Actinomycetota
GGG
Pro
>WENV180422965
OBVV01004655
23370
Actinomycetota
GCT
Ser
>WENV180422868
OBVV01002236
174149
Actinomycetota
GAT
Ile
>WENV180422982
OBVV01004986
338239
Actinomycetota
TTC
Glu
>WENV180423020
OBVV01006422
162208
Actinomycetota
TAC
Val
>WENV180422902
OBVV01003228
16219
Actinomycetota
GCT
Ser
>WENV180422869
OBVV01002236
235174
Actinomycetota
TGC
Ala
>WENV180422854
OBVV01002077
235101
Actinomycetota
TTT
Lys
>WENV180422968
OBVV01004676
121510
Actinomycetota
TAA
Leu
>WENV180422992
OBVV01005390
356045
Actinomycetota
GAC
Val
>WENV180422847
OBVV01001988
356045
Actinomycetota
GAC
Val
>WENV180423006
OBVV01006068
144625
Actinomycetota
GTC
Asp
>WENV180422925
OBVV01003903
144625
Actinomycetota
GTC
Asp
>WENV180422840
OBVV01001906
44855
Actinomycetota
TGA
Ser
>WENV180422993
OBVV01005390
235199
Actinomycetota
CAC
Val
>WENV180422848
OBVV01001988
235199
Actinomycetota
CAC
Val
>WENV180422890
OBVV01002846
44862
Actinomycetota
CGA
Ser
>WENV180423088
OBVV01009097
413665
Actinomycetota
TTG
Gln
>WENV180422938
OBVV01004418
254857
Actinomycetota
CCG
Arg
>WENV180423077
OBVV01008559
16223
Actinomycetota
GAG
Leu
>WENV180422937
OBVV01004368
144593
Actinomycetota
TAT
Ile
>WENV180422967
OBVV01004657
144700
Actinomycetota
CAT
Met
>WENV180423026
OBVV01006712
243671
Actinomycetota
CTC
Glu
>WENV180423113
OBVV01014576
98279
Actinomycetota
GTA
Tyr
>WENV180423027
OBVV01006712
338148
Actinomycetota
CTG
Gln
>WENV180423085
OBVV01008959
235148
Actinomycetota
GTT
Asn
>WENV180423084
OBVV01008959
235148
Actinomycetota
GTT
Asn
>WENV180423082
OBVV01008798
235148
Actinomycetota
GTT
Asn
>WENV180422964
OBVV01004632
235148
Actinomycetota
GTT
Asn
>WENV180422963
OBVV01004632
235148
Actinomycetota
GTT
Asn
>WENV180422989
OBVV01005234
144825
Actinomycetota
CAT
Met
>WENV180423065
OBVV01007935
235348
Actinomycetota
CCT
Arg
>WENV180423033
OBVV01007011
411554
Actinomycetota
CCC
Gly
>WENV180423039
OBVV01007247
113601
Actinomycetota
TAG
Leu
>WENV180422907
OBVV01003381
113601
Actinomycetota
TAG
Leu
>WENV180422895
OBVV01003068
144595
Actinomycetota
CAA
Leu
>WENV180422839
OBVV01001863
144595
Actinomycetota
CAA
Leu
>WENV180422874
OBVV01002400
145343
Actinomycetota
GGG
Pro
>WENV180422912
OBVV01003499
235149
Actinomycetota
CCT
Arg
>WENV180423038
OBVV01007247
235121
Actinomycetota
CGT
Thr
>WENV180422807
OBVV01001435
47164
Actinomycetota
GGA
Ser
>WENV180422808
OBVV01001448
144635
Actinomycetota
TGG
Pro
>WENV180422935
OBVV01004278
80622
Actinomycetota
CAG
Leu
>WENV180422918
OBVV01003641
80622
Actinomycetota
CAG
Leu
>WENV180423032
OBVV01006986
44851
Actinomycetota
TGA
Ser
>WENV180423061
OBVV01007752
16222
Actinomycetota
GAG
Leu
>WENV180423003
OBVV01005847
235173
Actinomycetota
GGC
Ala
>WENV180423002
OBVV01005755
235173
Actinomycetota
GGC
Ala
>WENV180423080
OBVV01008753
243162
Actinomycetota
GTT
Asn
>WENV180422981
OBVV01004842
144660
Actinomycetota
TAC
Val
>WENV180422966
OBVV01004657
95593
Actinomycetota
>WENV180422934
OBVV01004258
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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