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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180467726
OBYI01021384
267649
Bacillota
TAC
Val
>WENV180467390
OBYI01000191
37549
Bacillota
TAA
Leu
>WENV180467671
OBYI01007776
246023
Bacillota
TGC
Ala
>WENV180467408
OBYI01000242
152047
Bacillota
GGG
Pro
>WENV180467296
OBYI01000090
241761
Bacillota
TAC
Val
>WENV180467321
OBYI01000105
241761
Bacillota
TAC
Val
>WENV180467728
OBYI01022130
302152
Bacillota
CTT
Lys
>WENV180467320
OBYI01000105
339151
Bacillota
TTC
Glu
>WENV180467751
OBYI01033291
359258
Bacillota
TTG
Gln
>WENV180467298
OBYI01000090
342736
Bacillota
TTG
Gln
>WENV180467674
OBYI01008235
339935
Bacillota
GTT
Asn
>WENV180467319
OBYI01000105
296878
Bacillota
GTT
Asn
>WENV180467292
OBYI01000090
296878
Bacillota
GTT
Asn
>WENV180467750
OBYI01033291
238496
Bacillota
GTG
His
>WENV180467676
OBYI01008712
37269
Bacillota
TGA
Ser
>WENV180467495
OBYI01000448
37551
Bacillota
CGA
Ser
>WENV180467577
OBYI01000755
148268
Bacillota
CGG
Pro
>WENV180467682
OBYI01009548
18852
Bacillota
GCT
Ser
>WENV180467389
OBYI01000191
419945
Bacillota
GCA
Cys
>WENV180467609
OBYI01001108
419639
Bacillota
GCA
Cys
>WENV180467533
OBYI01000534
419639
Bacillota
GCA
Cys
>WENV180467413
OBYI01000242
152045
Bacillota
CAT
Met
>WENV180467563
OBYI01000722
152046
Bacillota
TCT
Arg
>WENV180467710
OBYI01016551
235127
Bacillota
TTT
Lys
>WENV180467596
OBYI01000962
152051
Bacillota
ACG
Arg
>WENV180467748
OBYI01031465
147674
Bacillota
TCT
Arg
>WENV180467611
OBYI01001123
277200
Bacillota
GGC
Ala
>WENV180467642
OBYI01002399
243098
Bacillota
GGT
Thr
>WENV180467497
OBYI01000449
344240
Bacillota
GCC
Gly
>WENV180467392
OBYI01000201
344240
Bacillota
GCC
Gly
>WENV180467603
OBYI01001058
152497
Bacillota
GTC
Asp
>WENV180467530
OBYI01000534
152497
Bacillota
GTC
Asp
>WENV180467412
OBYI01000242
281472
Bacillota
GGT
Thr
>WENV180467535
OBYI01000541
196632
Bacillota
GTC
Asp
>WENV180467496
OBYI01000449
196632
Bacillota
GTC
Asp
>WENV180467700
OBYI01015369
299139
Bacillota
TGC
Ala
>WENV180467415
OBYI01000247
299139
Bacillota
TGC
Ala
>WENV180467439
OBYI01000306
343021
Bacillota
CAT
Met
>WENV180467407
OBYI01000232
152018
Bacillota
CCT
Arg
>WENV180467604
OBYI01001058
384950
Bacillota
GCC
Gly
>WENV180467532
OBYI01000534
384950
Bacillota
GCC
Gly
>WENV180467424
OBYI01000280
384950
Bacillota
GCC
Gly
>WENV180467388
OBYI01000191
384950
Bacillota
GCC
Gly
>WENV180467291
OBYI01000090
384950
Bacillota
GCC
Gly
>WENV180467414
OBYI01000245
413179
Bacillota
CCC
Gly
>WENV180467536
OBYI01000541
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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