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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180476641
OBYY01002339
154063
Bacillota
CGG
Pro
>WENV180476570
OBYY01000513
339825
Bacillota
CCG
Arg
>WENV180476613
OBYY01000850
285684
Bacillota
CGT
Thr
>WENV180476667
OBYY01003674
235154
Bacillota
GTT
Asn
>WENV180476757
OBYY01020902
239201
Bacillota
GAA
Phe
>WENV180476761
OBYY01022573
239201
Bacillota
GAA
Phe
>WENV180476599
OBYY01000833
114359
Bacillota
TAG
Leu
>WENV180476724
OBYY01013286
235137
Bacillota
TGC
Ala
>WENV180476565
OBYY01000288
238494
Bacillota
GGC
Ala
>WENV180476764
OBYY01022698
235294
Bacillota
TGC
Ala
>WENV180476588
OBYY01000800
412345
Bacillota
CTG
Gln
>WENV180476670
OBYY01004352
432426
Bacillota
CCA
Trp
>WENV180476748
OBYY01018284
338143
Bacillota
CTC
Glu
>WENV180476680
OBYY01004959
147758
Bacillota
CGG
Pro
>WENV180476697
OBYY01009088
237265
Bacillota
TAC
Val
>WENV180476541
OBYY01000029
237265
Bacillota
TAC
Val
>WENV180476640
OBYY01002181
302152
Bacillota
CTT
Lys
>WENV180476566
OBYY01000295
147760
Bacillota
TCT
Arg
>WENV180476719
OBYY01012528
429429
Bacillota
CCA
Trp
>WENV180476709
OBYY01009605
41154
Bacillota
TAA
Leu
>WENV180476672
OBYY01004352
359258
Bacillota
TTG
Gln
>WENV180476540
OBYY01000029
8090
Bacillota
GGA
Ser
>WENV180476701
OBYY01009088
199192
Bacillota
ACG
Arg
>WENV180476575
OBYY01000556
339935
Bacillota
GTT
Asn
>WENV180476671
OBYY01004352
238496
Bacillota
GTG
His
>WENV180476766
OBYY01024088
149041
Bacillota
GTC
Asp
>WENV180476674
OBYY01004352
59329
Bacillota
CAA
Leu
>WENV180476606
OBYY01000833
144766
Bacillota
CAT
Met
>WENV180476612
OBYY01000850
390525
Bacillota
TTC
Glu
>WENV180476704
OBYY01009088
199741
Bacillota
CAT
Met
>WENV180476631
OBYY01001570
10680
Bacillota
GGA
Ser
>WENV180476673
OBYY01004352
412406
Bacillota
GCA
Cys
>WENV180476698
OBYY01009088
238497
Bacillota
TTT
Lys
>WENV180476703
OBYY01009088
146741
Bacillota
CAT
Met
>WENV180476584
OBYY01000630
59296
Bacillota
AAG
Leu
>WENV180476691
OBYY01007734
235127
Bacillota
TTT
Lys
>WENV180476774
OBYY01032086
147674
Bacillota
TCT
Arg
>WENV180476608
OBYY01000833
163753
Bacillota
TGG
Pro
>WENV180476717
OBYY01011942
199936
Bacillota
GAT
Ile
>WENV180476737
OBYY01015425
144672
Bacillota
TCT
Arg
>WENV180476564
OBYY01000288
238493
Bacillota
CGC
Ala
>WENV180476559
OBYY01000141
412403
Bacillota
CCC
Gly
>WENV180476569
OBYY01000396
45242
Bacillota
CAG
Leu
>WENV180476601
OBYY01000833
144762
Bacillota
TCT
Arg
>WENV180476623
OBYY01001192
347434
Bacillota
CTC
Glu
>WENV180476775
OBYY01032520
272488
Bacillota
GAA
Phe
>WENV180476772
OBYY01029822
3285
Bacillota
TGA
Ser
>WENV180476627
OBYY01001246
338131
Bacillota
GCC
Gly
>WENV180476619
OBYY01001108
37258
Bacillota
AAG
Leu
>WENV180476593
OBYY01000833
338207
Bacillota
TTC
Glu
>WENV180476758
OBYY01020902
113740
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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