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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
64 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180478062
OBZA01000048
59076
Bacillota
CAG
Leu
>WENV180478057
OBZA01000036
146681
Bacillota
TCT
Arg
>WENV180478015
OBZA01000008
347662
Bacillota
GTT
Asn
>WENV180478016
OBZA01000008
347662
Bacillota
GTT
Asn
>WENV180477973
OBZA01000002
415708
Bacillota
CCA
Trp
>WENV180478061
OBZA01000048
126706
Bacillota
GTC
Asp
>WENV180478008
OBZA01000006
243332
Bacillota
CTT
Lys
>WENV180478038
OBZA01000020
16430
Bacillota
GCT
Ser
>WENV180478236
OBZA01011513
16358
Bacillota
GCT
Ser
>WENV180478169
OBZA01001761
339354
Bacillota
TTG
Gln
>WENV180478036
OBZA01000020
239201
Bacillota
GAA
Phe
>WENV180477971
OBZA01000002
239201
Bacillota
GAA
Phe
>WENV180478207
OBZA01005105
295646
Bacillota
GTG
His
>WENV180478125
OBZA01000512
295646
Bacillota
GTG
His
>WENV180477994
OBZA01000004
147758
Bacillota
CGG
Pro
>WENV180478205
OBZA01004578
237265
Bacillota
TAC
Val
>WENV180478199
OBZA01004438
237265
Bacillota
TAC
Val
>WENV180478074
OBZA01000102
237268
Bacillota
CGC
Ala
>WENV180478026
OBZA01000020
238211
Bacillota
TGT
Thr
>WENV180478201
OBZA01004438
238211
Bacillota
TGT
Thr
>WENV180478011
OBZA01000008
238175
Bacillota
CGT
Thr
>WENV180478067
OBZA01000060
16359
Bacillota
CGA
Ser
>WENV180478032
OBZA01000020
147475
Bacillota
CAT
Met
>WENV180478200
OBZA01004438
237271
Bacillota
TTT
Lys
>WENV180478012
OBZA01000008
80836
Bacillota
GTA
Tyr
>WENV180477972
OBZA01000002
80836
Bacillota
GTA
Tyr
>WENV180478188
OBZA01004321
316443
Bacillota
GTC
Asp
>WENV180478171
OBZA01001761
45092
Bacillota
CAA
Leu
>WENV180478151
OBZA01001196
237262
Bacillota
CGT
Thr
>WENV180478202
OBZA01004578
237261
Bacillota
GTT
Asn
>WENV180478150
OBZA01001196
237261
Bacillota
GTT
Asn
>WENV180478050
OBZA01000028
45091
Bacillota
AAG
Leu
>WENV180478014
OBZA01000008
45091
Bacillota
AAG
Leu
>WENV180478039
OBZA01000020
390525
Bacillota
TTC
Glu
>WENV180477968
OBZA01000002
390525
Bacillota
TTC
Glu
>WENV180478058
OBZA01000038
339355
Bacillota
CCG
Arg
>WENV180477989
OBZA01000004
96049
Bacillota
TAG
Leu
>WENV180478108
OBZA01000293
237267
Bacillota
CTG
Gln
>WENV180478203
OBZA01004578
9240
Bacillota
GGA
Ser
>WENV180477995
OBZA01000004
268485
Bacillota
CCT
Arg
>WENV180477975
OBZA01000002
339811
Bacillota
TTG
Gln
>WENV180478190
OBZA01004321
109476
Bacillota
TAG
Leu
>WENV180478206
OBZA01004578
314670
Bacillota
GAA
Phe
>WENV180477965
OBZA01000002
147476
Bacillota
CTC
Glu
>WENV180478013
OBZA01000008
339352
Bacillota
TTG
Gln
>WENV180477974
OBZA01000002
242879
Bacillota
GTG
His
>WENV180478041
OBZA01000020
147466
Bacillota
GTC
Asp
>WENV180478035
OBZA01000020
147466
Bacillota
GTC
Asp
>WENV180477967
OBZA01000002
3277
Bacillota
GGA
Ser
>WENV180478204
OBZA01004578
237264
Bacillota
TTC
Glu
>WENV180477976
OBZA01000002
412335
Bacillota
GCA
Cys
>WENV180478059
OBZA01000042
339353
Bacillota
GTT
Asn
>WENV180478023
OBZA01000016
147478
Bacillota
TCT
Arg
>WENV180477970
OBZA01000002
163697
Bacillota
GTC
Asp
>WENV180477978
OBZA01000002
340948
Bacillota
CTG
Gln
>WENV180478029
OBZA01000020
145468
Bacillota
ACG
Arg
>WENV180477992
OBZA01000004
145468
Bacillota
ACG
Arg
>WENV180478033
OBZA01000020
16435
Bacillota
TGA
Ser
>WENV180478019
OBZA01000011
396055
Bacillota
GTT
Asn
>WENV180478116
OBZA01000443
237263
Bacillota
AGT
Thr
>WENV180478115
OBZA01000443
95877
Bacillota
TAG
Leu
>WENV180478010
OBZA01000008
237345
Bacillota
GTT
Asn
>WENV180477966
OBZA01000002
237345
Bacillota
GTT
Asn
>WENV180478089
OBZA01000118
237269
Bacillota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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