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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180507143
OCAT01000174
235146
Actinomycetota
CGT
Thr
>WENV180507360
OCAT01000661
119475
Actinomycetota
TAA
Leu
>WENV180507463
OCAT01001082
235347
Actinomycetota
GGC
Ala
>WENV180507377
OCAT01000743
166493
Actinomycetota
CTT
Lys
>WENV180507650
OCAT01002353
144589
Actinomycetota
ACG
Arg
>WENV180507651
OCAT01002353
144589
Actinomycetota
ACG
Arg
>WENV180507670
OCAT01002538
37070
Actinomycetota
CGA
Ser
>WENV180507464
OCAT01001091
144600
Actinomycetota
TGG
Pro
>WENV180508047
OCAT01019177
235092
Actinomycetota
CCG
Arg
>WENV180507678
OCAT01002689
235194
Actinomycetota
GTG
His
>WENV180507141
OCAT01000174
273786
Actinomycetota
CGT
Thr
>WENV180507660
OCAT01002422
158720
Actinomycetota
ACG
Arg
>WENV180507659
OCAT01002422
158720
Actinomycetota
ACG
Arg
>WENV180507708
OCAT01003363
411601
Actinomycetota
CCC
Gly
>WENV180507721
OCAT01003599
23370
Actinomycetota
GCT
Ser
>WENV180507890
OCAT01008303
174149
Actinomycetota
GAT
Ile
>WENV180507122
OCAT01000150
174149
Actinomycetota
GAT
Ile
>WENV180508006
OCAT01016588
338239
Actinomycetota
TTC
Glu
>WENV180507636
OCAT01002194
162208
Actinomycetota
TAC
Val
>WENV180507403
OCAT01000853
16219
Actinomycetota
GCT
Ser
>WENV180507891
OCAT01008303
235174
Actinomycetota
TGC
Ala
>WENV180507387
OCAT01000757
235174
Actinomycetota
TGC
Ala
>WENV180507123
OCAT01000150
235174
Actinomycetota
TGC
Ala
>WENV180507449
OCAT01001062
235101
Actinomycetota
TTT
Lys
>WENV180507390
OCAT01000767
121510
Actinomycetota
TAA
Leu
>WENV180507578
OCAT01001708
356045
Actinomycetota
GAC
Val
>WENV180507344
OCAT01000566
356045
Actinomycetota
GAC
Val
>WENV180507603
OCAT01002030
144625
Actinomycetota
GTC
Asp
>WENV180507533
OCAT01001481
44855
Actinomycetota
TGA
Ser
>WENV180508122
OCAT01027771
145345
Actinomycetota
TAC
Val
>WENV180507579
OCAT01001708
235199
Actinomycetota
CAC
Val
>WENV180507345
OCAT01000566
235199
Actinomycetota
CAC
Val
>WENV180507571
OCAT01001688
44862
Actinomycetota
CGA
Ser
>WENV180507462
OCAT01001082
413665
Actinomycetota
TTG
Gln
>WENV180507342
OCAT01000566
254857
Actinomycetota
CCG
Arg
>WENV180507291
OCAT01000427
16223
Actinomycetota
GAG
Leu
>WENV180507669
OCAT01002530
144593
Actinomycetota
TAT
Ile
>WENV180507476
OCAT01001153
144700
Actinomycetota
CAT
Met
>WENV180507713
OCAT01003519
238473
Actinomycetota
GTG
His
>WENV180507362
OCAT01000692
243671
Actinomycetota
CTC
Glu
>WENV180507634
OCAT01002185
98279
Actinomycetota
GTA
Tyr
>WENV180507363
OCAT01000692
338148
Actinomycetota
CTG
Gln
>WENV180508043
OCAT01018934
235148
Actinomycetota
GTT
Asn
>WENV180507508
OCAT01001333
235148
Actinomycetota
GTT
Asn
>WENV180507507
OCAT01001333
235148
Actinomycetota
GTT
Asn
>WENV180507401
OCAT01000822
235148
Actinomycetota
GTT
Asn
>WENV180507400
OCAT01000822
235148
Actinomycetota
GTT
Asn
>WENV180507674
OCAT01002594
176456
Actinomycetota
TCT
Arg
>WENV180507718
OCAT01003577
144825
Actinomycetota
CAT
Met
>WENV180507284
OCAT01000398
235348
Actinomycetota
CCT
Arg
>WENV180507320
OCAT01000478
411554
Actinomycetota
CCC
Gly
>WENV180507561
OCAT01001626
113601
Actinomycetota
TAG
Leu
>WENV180507142
OCAT01000174
113601
Actinomycetota
TAG
Leu
>WENV180507569
OCAT01001684
144595
Actinomycetota
CAA
Leu
>WENV180507139
OCAT01000171
144595
Actinomycetota
CAA
Leu
>WENV180507398
OCAT01000789
145343
Actinomycetota
GGG
Pro
>WENV180507781
OCAT01004627
235149
Actinomycetota
CCT
Arg
>WENV180507560
OCAT01001626
235121
Actinomycetota
CGT
Thr
>WENV180507364
OCAT01000692
47164
Actinomycetota
GGA
Ser
>WENV180507570
OCAT01001684
144635
Actinomycetota
TGG
Pro
>WENV180507630
OCAT01002149
80622
Actinomycetota
CAG
Leu
>WENV180508037
OCAT01018430
44851
Actinomycetota
TGA
Ser
>WENV180507615
OCAT01002097
16222
Actinomycetota
GAG
Leu
>WENV180507714
OCAT01003523
235173
Actinomycetota
GGC
Ala
>WENV180507388
OCAT01000757
235173
Actinomycetota
GGC
Ala
>WENV180508341
OCAT01109023
243162
Actinomycetota
GTT
Asn
>WENV180507405
OCAT01000863
144660
Actinomycetota
TAC
Val
>WENV180507475
OCAT01001153
95593
Actinomycetota
>WENV180507384
OCAT01000749
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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