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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180507162
OCAT01000209
235097
Bacteroidota
TTT
Lys
>WENV180507835
OCAT01005757
235097
Bacteroidota
TTT
Lys
>WENV180507866
OCAT01007392
235097
Bacteroidota
TTT
Lys
>WENV180507694
OCAT01003060
235102
Bacteroidota
CGT
Thr
>WENV180507024
OCAT01000037
144657
Bacteroidota
CGG
Pro
>WENV180507227
OCAT01000299
243025
Bacteroidota
CAT
Met
>WENV180507304
OCAT01000451
243025
Bacteroidota
CAT
Met
>WENV180507329
OCAT01000511
338155
Bacteroidota
CTC
Glu
>WENV180507048
OCAT01000053
58715
Bacteroidota
GAG
Leu
>WENV180507076
OCAT01000076
46165
Bacteroidota
TGA
Ser
>WENV180507402
OCAT01000832
17323
Bacteroidota
GGA
Ser
>WENV180508083
OCAT01023029
95618
Bacteroidota
TAG
Leu
>WENV180507040
OCAT01000047
338486
Bacteroidota
CAT
Met
>WENV180506989
OCAT01000017
338486
Bacteroidota
CAT
Met
>WENV180507934
OCAT01010551
415410
Bacteroidota
TTG
Gln
>WENV180507422
OCAT01000964
415410
Bacteroidota
TTG
Gln
>WENV180507047
OCAT01000053
59689
Bacteroidota
CAG
Leu
>WENV180507022
OCAT01000037
59689
Bacteroidota
CAG
Leu
>WENV180507259
OCAT01000347
344692
Bacteroidota
GGT
Thr
>WENV180507051
OCAT01000056
145504
Bacteroidota
TGT
Thr
>WENV180507573
OCAT01001693
341950
Bacteroidota
>WENV180508014
OCAT01016880
338124
Bacteroidota
CCG
Arg
>WENV180507288
OCAT01000419
235203
Bacteroidota
TTT
Lys
>WENV180507261
OCAT01000356
235203
Bacteroidota
TTT
Lys
>WENV180507074
OCAT01000076
238121
Bacteroidota
CTT
Lys
>WENV180507073
OCAT01000076
238121
Bacteroidota
CTT
Lys
>WENV180507887
OCAT01008119
338132
Bacteroidota
GCA
Cys
>WENV180507775
OCAT01004463
338132
Bacteroidota
GCA
Cys
>WENV180507689
OCAT01002891
338132
Bacteroidota
GCA
Cys
>WENV180507197
OCAT01000291
338132
Bacteroidota
GCA
Cys
>WENV180507075
OCAT01000076
45423
Bacteroidota
TGA
Ser
>WENV180507096
OCAT01000110
58714
Bacteroidota
CAA
Leu
>WENV180507010
OCAT01000035
235165
Bacteroidota
CCA
Trp
>WENV180507101
OCAT01000116
144933
Bacteroidota
TCT
Arg
>WENV180507287
OCAT01000418
144656
Bacteroidota
GTG
His
>WENV180507951
OCAT01011646
235207
Bacteroidota
CAT
Met
>WENV180507160
OCAT01000204
144659
Bacteroidota
GTG
His
>WENV180507159
OCAT01000204
144659
Bacteroidota
GTG
His
>WENV180507025
OCAT01000037
235180
Bacteroidota
CCA
Trp
>WENV180507167
OCAT01000214
144596
Bacteroidota
GGC
Ala
>WENV180507114
OCAT01000138
144596
Bacteroidota
GGC
Ala
>WENV180507626
OCAT01002134
80607
Bacteroidota
GTA
Tyr
>WENV180507525
OCAT01001423
80607
Bacteroidota
GTA
Tyr
>WENV180507410
OCAT01000882
80607
Bacteroidota
GTA
Tyr
>WENV180507258
OCAT01000341
16999
Bacteroidota
GGA
Ser
>WENV180507366
OCAT01000695
80614
Bacteroidota
>WENV180507260
OCAT01000352
80614
Bacteroidota
>WENV180507165
OCAT01000213
80614
Bacteroidota
>WENV180507246
OCAT01000318
154643
Bacteroidota
CAT
Met
>WENV180507818
OCAT01005579
144590
Bacteroidota
GTT
Asn
>WENV180507817
OCAT01005579
144590
Bacteroidota
GTT
Asn
>WENV180507998
OCAT01015173
95559
Bacteroidota
TAG
Leu
>WENV180507908
OCAT01008728
419272
Bacteroidota
CTG
Gln
>WENV180507861
OCAT01006969
144655
Bacteroidota
GGC
Ala
>WENV180507034
OCAT01000042
144639
Bacteroidota
GGC
Ala
>WENV180506971
OCAT01000007
338164
Bacteroidota
TTC
Glu
>WENV180506970
OCAT01000007
338164
Bacteroidota
TTC
Glu
>WENV180507368
OCAT01000702
95875
Bacteroidota
TAG
Leu
>WENV180508134
OCAT01029707
338314
Bacteroidota
CCT
Arg
>WENV180507084
OCAT01000096
240012
Bacteroidota
CCC
Gly
>WENV180508192
OCAT01039253
44852
Bacteroidota
TAA
Leu
>WENV180507899
OCAT01008559
44852
Bacteroidota
TAA
Leu
>WENV180507085
OCAT01000096
147439
Bacteroidota
TCT
Arg
>WENV180506957
OCAT01000002
150485
Bacteroidota
GTT
Asn
>WENV180506956
OCAT01000002
150485
Bacteroidota
GTT
Asn
>WENV180507043
OCAT01000050
411550
Bacteroidota
CTG
Gln
>WENV180507042
OCAT01000050
411550
Bacteroidota
CTG
Gln
>WENV180507599
OCAT01002010
338165
Bacteroidota
GGT
Thr
>WENV180506979
OCAT01000011
19528
Bacteroidota
GGA
Ser
>WENV180507958
OCAT01011879
50727
Bacteroidota
TGA
Ser
>WENV180507743
OCAT01004036
50727
Bacteroidota
TGA
Ser
>WENV180507189
OCAT01000266
50727
Bacteroidota
TGA
Ser
>WENV180507126
OCAT01000156
50727
Bacteroidota
TGA
Ser
>WENV180506978
OCAT01000011
50727
Bacteroidota
TGA
Ser
>WENV180506977
OCAT01000011
50727
Bacteroidota
TGA
Ser
>WENV180508262
OCAT01057864
132360
Bacteroidota
GGG
Pro
>WENV180508250
OCAT01054497
132360
Bacteroidota
GGG
Pro
>WENV180507559
OCAT01001621
132360
Bacteroidota
GGG
Pro
>WENV180506987
OCAT01000015
132360
Bacteroidota
GGG
Pro
>WENV180507330
OCAT01000513
425638
Bacteroidota
CTG
Gln
>WENV180506959
OCAT01000002
353927
Bacteroidota
TTC
Glu
>WENV180506958
OCAT01000002
353927
Bacteroidota
TTC
Glu
>WENV180507100
OCAT01000115
185921
Bacteroidota
GTC
Asp
>WENV180507099
OCAT01000115
185921
Bacteroidota
GTC
Asp
>WENV180507553
OCAT01001581
23696
Bacteroidota
GCT
Ser
>WENV180507328
OCAT01000511
23696
Bacteroidota
GCT
Ser
>WENV180507095
OCAT01000109
414426
Bacteroidota
CTG
Gln
>WENV180508266
OCAT01059616
16224
Bacteroidota
GGA
Ser
>WENV180507893
OCAT01008379
16224
Bacteroidota
GGA
Ser
>WENV180507500
OCAT01001282
151960
Bacteroidota
GGC
Ala
>WENV180508200
OCAT01040372
16220
Bacteroidota
GGA
Ser
>WENV180508221
OCAT01046522
338125
Bacteroidota
CCT
Arg
>WENV180507195
OCAT01000276
338125
Bacteroidota
CCT
Arg
>WENV180507060
OCAT01000060
235129
Bacteroidota
GCC
Gly
>WENV180507058
OCAT01000060
235129
Bacteroidota
GCC
Gly
>WENV180507046
OCAT01000053
235129
Bacteroidota
GCC
Gly
>WENV180507858
OCAT01006783
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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