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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180559389
OCKC01000087
147158
Actinomycetota
TTT
Lys
>WENV180559481
OCKC01000213
121519
Actinomycetota
TTG
Gln
>WENV180559387
OCKC01000087
147155
Actinomycetota
GTC
Asp
>WENV180559540
OCKC01003517
10569
Actinomycetota
GCT
Ser
>WENV180559342
OCKC01000045
237816
Actinomycetota
GGT
Thr
>WENV180559400
OCKC01000094
37209
Actinomycetota
GAG
Leu
>WENV180559279
OCKC01000024
147157
Actinomycetota
TAC
Val
>WENV180559413
OCKC01000111
80900
Actinomycetota
TGA
Ser
>WENV180559544
OCKC01003886
338474
Actinomycetota
CAT
Met
>WENV180559289
OCKC01000027
339641
Actinomycetota
GAC
Val
>WENV180559288
OCKC01000027
411803
Actinomycetota
GCA
Cys
>WENV180559280
OCKC01000024
339640
Actinomycetota
CTG
Gln
>WENV180559352
OCKC01000053
237815
Actinomycetota
CTT
Lys
>WENV180559246
OCKC01000008
237808
Actinomycetota
TGC
Ala
>WENV180559480
OCKC01000209
80899
Actinomycetota
CAG
Leu
>WENV180559388
OCKC01000087
147156
Actinomycetota
GAA
Phe
>WENV180559435
OCKC01000123
237804
Actinomycetota
TGT
Thr
>WENV180559445
OCKC01000155
412879
Actinomycetota
TCC
Gly
>WENV180559343
OCKC01000045
338489
Actinomycetota
CAT
Met
>WENV180559298
OCKC01000029
237803
Actinomycetota
CGT
Thr
>WENV180559281
OCKC01000024
237812
Actinomycetota
CTC
Glu
>WENV180559416
OCKC01000111
45149
Actinomycetota
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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