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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180593661
OCOX01131181
237493
Alphaproteobacteria
CCA
Trp
>WENV180593072
OCOX01000378
241021
Alphaproteobacteria
GGC
Ala
>WENV180593143
OCOX01002042
113700
Alphaproteobacteria
>WENV180593061
OCOX01000328
176908
Alphaproteobacteria
GTC
Asp
>WENV180593136
OCOX01001779
199776
Alphaproteobacteria
CGG
Pro
>WENV180593300
OCOX01018547
338282
Alphaproteobacteria
GTT
Asn
>WENV180593765
OCOX01187566
338282
Alphaproteobacteria
GTT
Asn
>WENV180593065
OCOX01000333
147083
Alphaproteobacteria
GGG
Pro
>WENV180593453
OCOX01046212
162801
Alphaproteobacteria
GTG
His
>WENV180593671
OCOX01134589
200119
Alphaproteobacteria
CAT
Met
>WENV180593517
OCOX01062690
147879
Alphaproteobacteria
TGG
Pro
>WENV180593127
OCOX01001412
113716
Alphaproteobacteria
CAA
Leu
>WENV180593084
OCOX01000579
28682
Alphaproteobacteria
GGA
Ser
>WENV180593141
OCOX01001919
252148
Alphaproteobacteria
TGT
Thr
>WENV180593107
OCOX01000856
340106
Alphaproteobacteria
GCC
Gly
>WENV180593460
OCOX01047002
237281
Alphaproteobacteria
CGT
Thr
>WENV180593214
OCOX01007712
359842
Alphaproteobacteria
GAC
Val
>WENV180593491
OCOX01054097
338760
Alphaproteobacteria
GAA
Phe
>WENV180593137
OCOX01001851
370641
Alphaproteobacteria
GCC
Gly
>WENV180593650
OCOX01124332
412281
Alphaproteobacteria
CTG
Gln
>WENV180593039
OCOX01000063
412424
Alphaproteobacteria
TCC
Gly
>WENV180593585
OCOX01088067
95631
Alphaproteobacteria
TAG
Leu
>WENV180593047
OCOX01000112
236256
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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