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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180601287
OCPQ01019350
235146
Actinomycetota
CGT
Thr
>WENV180601098
OCPQ01006326
166493
Actinomycetota
CTT
Lys
>WENV180600958
OCPQ01003631
16400
Actinomycetota
GAG
Leu
>WENV180601305
OCPQ01022865
273786
Actinomycetota
CGT
Thr
>WENV180601079
OCPQ01005904
338239
Actinomycetota
TTC
Glu
>WENV180601044
OCPQ01005267
162208
Actinomycetota
TAC
Val
>WENV180601468
OCPQ01051125
16219
Actinomycetota
GCT
Ser
>WENV180600908
OCPQ01002701
235174
Actinomycetota
TGC
Ala
>WENV180600849
OCPQ01001779
235174
Actinomycetota
TGC
Ala
>WENV180601151
OCPQ01009152
235101
Actinomycetota
TTT
Lys
>WENV180600825
OCPQ01001510
145345
Actinomycetota
TAC
Val
>WENV180600967
OCPQ01003775
413665
Actinomycetota
TTG
Gln
>WENV180601086
OCPQ01006035
254857
Actinomycetota
CCG
Arg
>WENV180601217
OCPQ01012695
113703
Actinomycetota
TAG
Leu
>WENV180601036
OCPQ01004867
44942
Actinomycetota
TGA
Ser
>WENV180601213
OCPQ01012488
243671
Actinomycetota
CTC
Glu
>WENV180600931
OCPQ01003116
98279
Actinomycetota
GTA
Tyr
>WENV180601214
OCPQ01012488
338148
Actinomycetota
CTG
Gln
>WENV180601119
OCPQ01007099
237792
Actinomycetota
CCT
Arg
>WENV180601186
OCPQ01010553
113702
Actinomycetota
TAA
Leu
>WENV180601531
OCPQ01063967
145347
Actinomycetota
CAA
Leu
>WENV180601346
OCPQ01027082
338139
Actinomycetota
GTT
Asn
>WENV180601094
OCPQ01006264
237794
Actinomycetota
CCG
Arg
>WENV180601467
OCPQ01050466
16467
Actinomycetota
GCT
Ser
>WENV180600986
OCPQ01004056
411554
Actinomycetota
CCC
Gly
>WENV180600918
OCPQ01002882
411554
Actinomycetota
CCC
Gly
>WENV180601306
OCPQ01022865
113601
Actinomycetota
TAG
Leu
>WENV180601110
OCPQ01006649
144595
Actinomycetota
CAA
Leu
>WENV180601402
OCPQ01035953
235149
Actinomycetota
CCT
Arg
>WENV180601189
OCPQ01010724
51286
Actinomycetota
TGA
Ser
>WENV180601506
OCPQ01058844
145269
Actinomycetota
CAT
Met
>WENV180601216
OCPQ01012695
235121
Actinomycetota
CGT
Thr
>WENV180600615
OCPQ01000449
47164
Actinomycetota
GGA
Ser
>WENV180600988
OCPQ01004148
119485
Actinomycetota
TAA
Leu
>WENV180601091
OCPQ01006201
429234
Actinomycetota
CTG
Gln
>WENV180600914
OCPQ01002822
80622
Actinomycetota
CAG
Leu
>WENV180601230
OCPQ01013546
163948
Actinomycetota
CAT
Met
>WENV180600850
OCPQ01001779
235173
Actinomycetota
GGC
Ala
>WENV180600909
OCPQ01002701
235173
Actinomycetota
GGC
Ala
>WENV180601433
OCPQ01042491
243162
Actinomycetota
GTT
Asn
>WENV180601208
OCPQ01011860
278447
Actinomycetota
GTG
His
>WENV180601334
OCPQ01025458
267574
Actinomycetota
CAC
Val
>WENV180601218
OCPQ01012813
267574
Actinomycetota
CAC
Val
>WENV180600898
OCPQ01002448
95593
Actinomycetota
>WENV180600832
OCPQ01001640
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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