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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180618480
OCQB01000153
235097
Bacteroidota
TTT
Lys
>WENV180619710
OCQB01009395
235097
Bacteroidota
TTT
Lys
>WENV180619908
OCQB01016150
235097
Bacteroidota
TTT
Lys
>WENV180620718
OCQB01276117
141635
Bacteroidota
TAC
Val
>WENV180618423
OCQB01000105
235102
Bacteroidota
CGT
Thr
>WENV180620624
OCQB01154541
267954
Bacteroidota
GCC
Gly
>WENV180618805
OCQB01000558
243025
Bacteroidota
CAT
Met
>WENV180619450
OCQB01004199
338155
Bacteroidota
CTC
Glu
>WENV180619926
OCQB01016866
153993
Bacteroidota
GAT
Ile
>WENV180619516
OCQB01005084
343138
Bacteroidota
CCT
Arg
>WENV180620247
OCQB01044669
58715
Bacteroidota
GAG
Leu
>WENV180619038
OCQB01001180
17323
Bacteroidota
GGA
Ser
>WENV180619628
OCQB01007493
95618
Bacteroidota
TAG
Leu
>WENV180619772
OCQB01011409
338486
Bacteroidota
CAT
Met
>WENV180618894
OCQB01000735
411543
Bacteroidota
CTG
Gln
>WENV180619215
OCQB01002105
59689
Bacteroidota
CAG
Leu
>WENV180618878
OCQB01000681
436206
Bacteroidota
TTG
Gln
>WENV180618322
OCQB01000043
436206
Bacteroidota
TTG
Gln
>WENV180618770
OCQB01000505
20893
Bacteroidota
GGA
Ser
>WENV180618958
OCQB01000899
344692
Bacteroidota
GGT
Thr
>WENV180618696
OCQB01000394
344692
Bacteroidota
GGT
Thr
>WENV180620053
OCQB01025063
145504
Bacteroidota
TGT
Thr
>WENV180618966
OCQB01000927
338124
Bacteroidota
CCG
Arg
>WENV180620167
OCQB01035037
235203
Bacteroidota
TTT
Lys
>WENV180619155
OCQB01001773
235203
Bacteroidota
TTT
Lys
>WENV180620169
OCQB01035146
126641
Bacteroidota
TAC
Val
>WENV180619059
OCQB01001275
338132
Bacteroidota
GCA
Cys
>WENV180619058
OCQB01001275
338132
Bacteroidota
GCA
Cys
>WENV180619031
OCQB01001151
338132
Bacteroidota
GCA
Cys
>WENV180618312
OCQB01000036
338132
Bacteroidota
GCA
Cys
>WENV180619702
OCQB01009247
144688
Bacteroidota
CAT
Met
>WENV180619894
OCQB01015367
45423
Bacteroidota
TGA
Ser
>WENV180618421
OCQB01000104
193809
Bacteroidota
CAT
Met
>WENV180619313
OCQB01002865
181746
Bacteroidota
GGC
Ala
>WENV180619312
OCQB01002864
58714
Bacteroidota
CAA
Leu
>WENV180620103
OCQB01028258
235165
Bacteroidota
CCA
Trp
>WENV180619104
OCQB01001444
280660
Bacteroidota
CCA
Trp
>WENV180619479
OCQB01004597
301449
Bacteroidota
CGG
Pro
>WENV180619062
OCQB01001309
301449
Bacteroidota
CGG
Pro
>WENV180618366
OCQB01000069
301449
Bacteroidota
CGG
Pro
>WENV180619519
OCQB01005105
144933
Bacteroidota
TCT
Arg
>WENV180619809
OCQB01012561
303954
Bacteroidota
GCC
Gly
>WENV180618449
OCQB01000126
144656
Bacteroidota
GTG
His
>WENV180620723
OCQB01277003
235207
Bacteroidota
CAT
Met
>WENV180618543
OCQB01000219
235207
Bacteroidota
CAT
Met
>WENV180619356
OCQB01003204
143169
Bacteroidota
GGG
Pro
>WENV180619296
OCQB01002779
143169
Bacteroidota
GGG
Pro
>WENV180619026
OCQB01001141
143169
Bacteroidota
GGG
Pro
>WENV180618517
OCQB01000186
143169
Bacteroidota
GGG
Pro
>WENV180619705
OCQB01009273
235180
Bacteroidota
CCA
Trp
>WENV180620642
OCQB01167217
80607
Bacteroidota
GTA
Tyr
>WENV180618391
OCQB01000085
80607
Bacteroidota
GTA
Tyr
>WENV180618559
OCQB01000241
113604
Bacteroidota
>WENV180619671
OCQB01008356
80614
Bacteroidota
>WENV180619527
OCQB01005286
80614
Bacteroidota
>WENV180618427
OCQB01000107
144590
Bacteroidota
GTT
Asn
>WENV180618426
OCQB01000107
144590
Bacteroidota
GTT
Asn
>WENV180618544
OCQB01000221
95559
Bacteroidota
TAG
Leu
>WENV180618502
OCQB01000175
144655
Bacteroidota
GGC
Ala
>WENV180620203
OCQB01039356
144639
Bacteroidota
GGC
Ala
>WENV180619725
OCQB01009914
338164
Bacteroidota
TTC
Glu
>WENV180619515
OCQB01005084
338164
Bacteroidota
TTC
Glu
>WENV180619514
OCQB01005084
338164
Bacteroidota
TTC
Glu
>WENV180619047
OCQB01001210
95875
Bacteroidota
TAG
Leu
>WENV180619067
OCQB01001318
338314
Bacteroidota
CCT
Arg
>WENV180620073
OCQB01026822
240012
Bacteroidota
CCC
Gly
>WENV180618776
OCQB01000509
44852
Bacteroidota
TAA
Leu
>WENV180618275
OCQB01000023
44852
Bacteroidota
TAA
Leu
>WENV180619605
OCQB01006888
147439
Bacteroidota
TCT
Arg
>WENV180620166
OCQB01034551
280513
Bacteroidota
TTT
Lys
>WENV180618907
OCQB01000767
150485
Bacteroidota
GTT
Asn
>WENV180618906
OCQB01000767
150485
Bacteroidota
GTT
Asn
>WENV180618905
OCQB01000767
150485
Bacteroidota
GTT
Asn
>WENV180619203
OCQB01002009
411550
Bacteroidota
CTG
Gln
>WENV180619202
OCQB01002009
411550
Bacteroidota
CTG
Gln
>WENV180619173
OCQB01001816
425638
Bacteroidota
CTG
Gln
>WENV180618190
OCQB01000004
425638
Bacteroidota
CTG
Gln
>WENV180619863
OCQB01014243
94703
Bacteroidota
GTA
Tyr
>WENV180619522
OCQB01005162
94703
Bacteroidota
GTA
Tyr
>WENV180619360
OCQB01003253
94703
Bacteroidota
GTA
Tyr
>WENV180619064
OCQB01001309
94703
Bacteroidota
GTA
Tyr
>WENV180619034
OCQB01001177
94703
Bacteroidota
GTA
Tyr
>WENV180619004
OCQB01001047
94703
Bacteroidota
GTA
Tyr
>WENV180618191
OCQB01000004
94703
Bacteroidota
GTA
Tyr
>WENV180619660
OCQB01008046
353927
Bacteroidota
TTC
Glu
>WENV180618418
OCQB01000102
353927
Bacteroidota
TTC
Glu
>WENV180619465
OCQB01004375
185921
Bacteroidota
GTC
Asp
>WENV180619464
OCQB01004375
185921
Bacteroidota
GTC
Asp
>WENV180620115
OCQB01029993
139062
Bacteroidota
TGG
Pro
>WENV180619377
OCQB01003419
23696
Bacteroidota
GCT
Ser
>WENV180618345
OCQB01000057
414426
Bacteroidota
CTG
Gln
>WENV180619517
OCQB01005102
56823
Bacteroidota
TGA
Ser
>WENV180619023
OCQB01001120
56823
Bacteroidota
TGA
Ser
>WENV180618831
OCQB01000596
56823
Bacteroidota
TGA
Ser
>WENV180618509
OCQB01000183
56823
Bacteroidota
TGA
Ser
>WENV180618408
OCQB01000098
56823
Bacteroidota
TGA
Ser
>WENV180618882
OCQB01000686
55270
Bacteroidota
TGA
Ser
>WENV180618230
OCQB01000012
151960
Bacteroidota
GGC
Ala
>WENV180618394
OCQB01000087
16220
Bacteroidota
GGA
Ser
>WENV180618276
OCQB01000023
338125
Bacteroidota
CCT
Arg
>WENV180618344
OCQB01000057
313363
Bacteroidota
GAA
Phe
>WENV180619135
OCQB01001624
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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