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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180639898
OCRL01000212
147158
Actinomycetota
TTT
Lys
>WENV180639518
OCRL01000018
290172
Actinomycetota
TGC
Ala
>WENV180639900
OCRL01000212
147155
Actinomycetota
GTC
Asp
>WENV180639553
OCRL01000029
314498
Actinomycetota
GGC
Ala
>WENV180639788
OCRL01000133
237816
Actinomycetota
GGT
Thr
>WENV180639496
OCRL01000014
304559
Actinomycetota
GCC
Gly
>WENV180639666
OCRL01000062
37209
Actinomycetota
GAG
Leu
>WENV180639505
OCRL01000014
147157
Actinomycetota
TAC
Val
>WENV180639647
OCRL01000053
80900
Actinomycetota
TGA
Ser
>WENV180639557
OCRL01000029
440908
Actinomycetota
GCA
Cys
>WENV180639498
OCRL01000014
339641
Actinomycetota
GAC
Val
>WENV180639746
OCRL01000110
147348
Actinomycetota
TAA
Leu
>WENV180639555
OCRL01000029
392594
Actinomycetota
GAC
Val
>WENV180639644
OCRL01000053
428901
Actinomycetota
CCC
Gly
>WENV180639494
OCRL01000014
372831
Actinomycetota
CTG
Gln
>WENV180639649
OCRL01000053
289966
Actinomycetota
ACG
Arg
>WENV180640099
OCRL01000515
237815
Actinomycetota
CTT
Lys
>WENV180639559
OCRL01000029
162402
Actinomycetota
GGG
Pro
>WENV180639645
OCRL01000053
80899
Actinomycetota
CAG
Leu
>WENV180639901
OCRL01000212
147156
Actinomycetota
GAA
Phe
>WENV180639454
OCRL01000008
246365
Actinomycetota
ACG
Arg
>WENV180639456
OCRL01000008
240124
Actinomycetota
CGT
Thr
>WENV180639558
OCRL01000029
388111
Actinomycetota
>WENV180639789
OCRL01000133
338489
Actinomycetota
CAT
Met
>WENV180639520
OCRL01000018
237803
Actinomycetota
CGT
Thr
>WENV180639495
OCRL01000014
237812
Actinomycetota
CTC
Glu
>WENV180639650
OCRL01000053
45149
Actinomycetota
CGA
Ser
>WENV180639787
OCRL01000133
96033
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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