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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180698435
ODDH01000590
243647
Bacillota
TTT
Lys
>WENV180698384
ODDH01000013
178679
Bacillota
CAT
Met
>WENV180698422
ODDH01000291
16842
Bacillota
CGA
Ser
>WENV180698378
ODDH01000013
389888
Bacillota
GCC
Gly
>WENV180698606
ODDH01035668
235137
Bacillota
TGC
Ala
>WENV180698376
ODDH01000013
308424
Bacillota
TTT
Lys
>WENV180698412
ODDH01000171
308424
Bacillota
TTT
Lys
>WENV180698414
ODDH01000211
16834
Bacillota
GCT
Ser
>WENV180698393
ODDH01000022
114002
Bacillota
CAA
Leu
>WENV180698483
ODDH01006481
37437
Bacillota
TAA
Leu
>WENV180698380
ODDH01000013
162028
Bacillota
ACG
Arg
>WENV180698410
ODDH01000171
113951
Bacillota
GTA
Tyr
>WENV180698390
ODDH01000013
113951
Bacillota
GTA
Tyr
>WENV180698416
ODDH01000241
243612
Bacillota
TAC
Val
>WENV180698430
ODDH01000332
147135
Bacillota
ACG
Arg
>WENV180698388
ODDH01000013
242848
Bacillota
GAA
Phe
>WENV180698402
ODDH01000097
342895
Bacillota
CAT
Met
>WENV180698662
ODDH01061957
190275
Bacillota
TCT
Arg
>WENV180698529
ODDH01012155
194150
Bacillota
TGG
Pro
>WENV180698649
ODDH01056808
235197
Bacillota
GTC
Asp
>WENV180698433
ODDH01000590
368876
Bacillota
GCC
Gly
>WENV180698407
ODDH01000171
147183
Bacillota
GTT
Asn
>WENV180698394
ODDH01000024
147183
Bacillota
GTT
Asn
>WENV180698369
ODDH01000003
147183
Bacillota
GTT
Asn
>WENV180698404
ODDH01000141
243613
Bacillota
GTG
His
>WENV180698428
ODDH01000323
152491
Bacillota
CAT
Met
>WENV180698424
ODDH01000323
273029
Bacillota
TGT
Thr
>WENV180698427
ODDH01000323
281472
Bacillota
GGT
Thr
>WENV180698401
ODDH01000073
413657
Bacillota
CCC
Gly
>WENV180698444
ODDH01001099
287034
Bacillota
GTT
Asn
>WENV180698434
ODDH01000590
287034
Bacillota
GTT
Asn
>WENV180698405
ODDH01000141
343027
Bacillota
TTG
Gln
>WENV180698370
ODDH01000005
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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