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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180728821
ODGU01102094
178679
Bacillota
CAT
Met
>WENV180727702
ODGU01010179
37213
Bacillota
TGA
Ser
>WENV180728563
ODGU01063883
37213
Bacillota
TGA
Ser
>WENV180728615
ODGU01070349
37213
Bacillota
TGA
Ser
>WENV180726844
ODGU01000713
342730
Bacillota
CTC
Glu
>WENV180727117
ODGU01002254
342730
Bacillota
CTC
Glu
>WENV180727118
ODGU01002254
342730
Bacillota
CTC
Glu
>WENV180727921
ODGU01016142
342730
Bacillota
CTC
Glu
>WENV180727922
ODGU01016142
342730
Bacillota
CTC
Glu
>WENV180729136
ODGU01215907
235693
Bacillota
GGT
Thr
>WENV180729121
ODGU01207054
267556
Bacillota
TAC
Val
>WENV180727608
ODGU01008483
339890
Bacillota
TTG
Gln
>WENV180728918
ODGU01121189
156189
Bacillota
GAT
Ile
>WENV180729216
ODGU01262779
280493
Bacillota
CCA
Trp
>WENV180729278
ODGU01314041
148348
Bacillota
GTC
Asp
>WENV180728925
ODGU01123261
148348
Bacillota
GTC
Asp
>WENV180729176
ODGU01238462
243099
Bacillota
GTT
Asn
>WENV180729069
ODGU01180079
243099
Bacillota
GTT
Asn
>WENV180728972
ODGU01137106
243099
Bacillota
GTT
Asn
>WENV180728753
ODGU01087611
243099
Bacillota
GTT
Asn
>WENV180728717
ODGU01084027
243099
Bacillota
GTT
Asn
>WENV180728664
ODGU01075655
243099
Bacillota
GTT
Asn
>WENV180729056
ODGU01173108
235150
Bacillota
TGC
Ala
>WENV180728963
ODGU01131957
235150
Bacillota
TGC
Ala
>WENV180729150
ODGU01221150
235137
Bacillota
TGC
Ala
>WENV180728899
ODGU01118542
235137
Bacillota
TGC
Ala
>WENV180729320
ODGU01333959
241761
Bacillota
TAC
Val
>WENV180728956
ODGU01130515
6995
Bacillota
TGA
Ser
>WENV180728901
ODGU01119645
268272
Bacillota
TGC
Ala
>WENV180728419
ODGU01048067
268272
Bacillota
TGC
Ala
>WENV180729335
ODGU01339432
239076
Bacillota
GAA
Phe
>WENV180729344
ODGU01340058
340265
Bacillota
GCC
Gly
>WENV180727365
ODGU01004594
340265
Bacillota
GCC
Gly
>WENV180727295
ODGU01003986
340265
Bacillota
GCC
Gly
>WENV180728476
ODGU01052433
144763
Bacillota
TGG
Pro
>WENV180728662
ODGU01075391
162028
Bacillota
ACG
Arg
>WENV180729153
ODGU01224404
113951
Bacillota
GTA
Tyr
>WENV180728076
ODGU01023460
341796
Bacillota
CCG
Arg
>WENV180726607
ODGU01000174
341796
Bacillota
CCG
Arg
>WENV180727671
ODGU01009336
338676
Bacillota
CCG
Arg
>WENV180729326
ODGU01337350
81373
Bacillota
GTA
Tyr
>WENV180728118
ODGU01025335
81373
Bacillota
GTA
Tyr
>WENV180728106
ODGU01024569
81373
Bacillota
GTA
Tyr
>WENV180726810
ODGU01000602
81373
Bacillota
GTA
Tyr
>WENV180729244
ODGU01284296
144599
Bacillota
GTC
Asp
>WENV180728825
ODGU01102094
242848
Bacillota
GAA
Phe
>WENV180729127
ODGU01209166
10680
Bacillota
GGA
Ser
>WENV180728894
ODGU01117968
344183
Bacillota
CTG
Gln
>WENV180729292
ODGU01322073
241471
Bacillota
TGC
Ala
>WENV180729182
ODGU01240278
241471
Bacillota
TGC
Ala
>WENV180728787
ODGU01096354
241471
Bacillota
TGC
Ala
>WENV180728709
ODGU01083451
241471
Bacillota
TGC
Ala
>WENV180728820
ODGU01102094
148057
Bacillota
CAT
Met
>WENV180728999
ODGU01147875
96694
Bacillota
TAG
Leu
>WENV180727687
ODGU01009613
96694
Bacillota
TAG
Leu
>WENV180727444
ODGU01005559
96694
Bacillota
TAG
Leu
>WENV180729217
ODGU01262779
154711
Bacillota
TGG
Pro
>WENV180729299
ODGU01322647
152019
Bacillota
GAT
Ile
>WENV180728788
ODGU01096354
152019
Bacillota
GAT
Ile
>WENV180728710
ODGU01083451
152019
Bacillota
GAT
Ile
>WENV180729240
ODGU01280486
235197
Bacillota
GTC
Asp
>WENV180729076
ODGU01185443
84171
Bacillota
GAG
Leu
>WENV180729348
ODGU01340325
241526
Bacillota
CTT
Lys
>WENV180728923
ODGU01123261
241526
Bacillota
CTT
Lys
>WENV180728574
ODGU01065326
241526
Bacillota
CTT
Lys
>WENV180728253
ODGU01033577
241526
Bacillota
CTT
Lys
>WENV180728024
ODGU01020132
241526
Bacillota
CTT
Lys
>WENV180726812
ODGU01000602
241526
Bacillota
CTT
Lys
>WENV180729238
ODGU01276307
147183
Bacillota
GTT
Asn
>WENV180729152
ODGU01221940
347851
Bacillota
TTC
Glu
>WENV180729040
ODGU01167858
347851
Bacillota
TTC
Glu
>WENV180728399
ODGU01046388
347851
Bacillota
TTC
Glu
>WENV180728237
ODGU01032967
347851
Bacillota
TTC
Glu
>WENV180728500
ODGU01054597
127572
Bacillota
ACG
Arg
>WENV180727679
ODGU01009528
127572
Bacillota
ACG
Arg
>WENV180727500
ODGU01006421
127572
Bacillota
ACG
Arg
>WENV180728658
ODGU01075391
256920
Bacillota
TTT
Lys
>WENV180729137
ODGU01215907
152491
Bacillota
CAT
Met
>WENV180726945
ODGU01001162
243098
Bacillota
GGT
Thr
>WENV180729279
ODGU01317411
241638
Bacillota
GTG
His
>WENV180729167
ODGU01234830
241638
Bacillota
GTG
His
>WENV180728931
ODGU01126415
241638
Bacillota
GTG
His
>WENV180727833
ODGU01013466
152018
Bacillota
CCT
Arg
>WENV180727758
ODGU01011669
152018
Bacillota
CCT
Arg
>WENV180728039
ODGU01021570
81598
Bacillota
CAG
Leu
>WENV180728575
ODGU01065422
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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