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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180729087
ODGU01189860
48052
Fusobacteriota
TAA
Leu
>WENV180728673
ODGU01076033
159267
Fusobacteriota
CAT
Met
>WENV180728597
ODGU01067978
242888
Fusobacteriota
GTT
Asn
>WENV180728696
ODGU01082532
242888
Fusobacteriota
GTT
Asn
>WENV180727772
ODGU01011962
151858
Fusobacteriota
GAT
Ile
>WENV180729255
ODGU01301354
151858
Fusobacteriota
GAT
Ile
>WENV180729315
ODGU01328961
151860
Fusobacteriota
ACG
Arg
>WENV180728211
ODGU01031633
151857
Fusobacteriota
TCT
Arg
>WENV180728668
ODGU01076033
156827
Fusobacteriota
GTC
Asp
>WENV180728670
ODGU01076033
115931
Fusobacteriota
TAG
Leu
>WENV180727621
ODGU01008580
115931
Fusobacteriota
TAG
Leu
>WENV180728374
ODGU01044242
152483
Fusobacteriota
GTC
Asp
>WENV180729294
ODGU01322331
246241
Fusobacteriota
TGC
Ala
>WENV180729133
ODGU01214950
246241
Fusobacteriota
TGC
Ala
>WENV180728937
ODGU01127185
246241
Fusobacteriota
TGC
Ala
>WENV180728742
ODGU01086268
246241
Fusobacteriota
TGC
Ala
>WENV180729185
ODGU01245203
343015
Fusobacteriota
TTG
Gln
>WENV180728050
ODGU01021965
155082
Fusobacteriota
TCG
Arg
>WENV180728669
ODGU01076033
242889
Fusobacteriota
TGT
Thr
>WENV180728313
ODGU01038282
242889
Fusobacteriota
TGT
Thr
>WENV180728613
ODGU01070009
60218
Fusobacteriota
CAA
Leu
>WENV180728852
ODGU01108716
242891
Fusobacteriota
CTT
Lys
>WENV180729256
ODGU01301354
151855
Fusobacteriota
TGC
Ala
>WENV180728672
ODGU01076033
151855
Fusobacteriota
TGC
Ala
>WENV180727773
ODGU01011962
151855
Fusobacteriota
TGC
Ala
>WENV180729276
ODGU01312327
243606
Fusobacteriota
TTT
Lys
>WENV180729144
ODGU01218776
243606
Fusobacteriota
TTT
Lys
>WENV180728807
ODGU01099394
243606
Fusobacteriota
TTT
Lys
>WENV180728412
ODGU01047776
243606
Fusobacteriota
TTT
Lys
>WENV180729113
ODGU01204442
151859
Fusobacteriota
TCG
Arg
>WENV180729047
ODGU01170098
152485
Fusobacteriota
TCT
Arg
>WENV180728914
ODGU01121169
152485
Fusobacteriota
TCT
Arg
>WENV180728808
ODGU01099394
152485
Fusobacteriota
TCT
Arg
>WENV180728212
ODGU01031633
127801
Fusobacteriota
CAT
Met
>WENV180728851
ODGU01108716
267548
Fusobacteriota
TCC
Gly
>WENV180728209
ODGU01031633
267548
Fusobacteriota
TCC
Gly
>WENV180727618
ODGU01008580
267548
Fusobacteriota
TCC
Gly
>WENV180727619
ODGU01008580
242887
Fusobacteriota
GTG
His
>WENV180728534
ODGU01059894
151854
Fusobacteriota
TGG
Pro
>WENV180727617
ODGU01008580
151854
Fusobacteriota
TGG
Pro
>WENV180728210
ODGU01031633
248546
Fusobacteriota
TTT
Lys
>WENV180727620
ODGU01008580
248546
Fusobacteriota
TTT
Lys
>WENV180728850
ODGU01108716
415120
Fusobacteriota
GCA
Cys
>WENV180728186
ODGU01029455
37553
Fusobacteriota
GCT
Ser
>WENV180728214
ODGU01031633
113955
Fusobacteriota
>WENV180728185
ODGU01029455
113955
Fusobacteriota
>WENV180729301
ODGU01322744
246346
Fusobacteriota
TTT
Lys
>WENV180729046
ODGU01170098
246346
Fusobacteriota
TTT
Lys
>WENV180728913
ODGU01121169
246346
Fusobacteriota
TTT
Lys
>WENV180728483
ODGU01052536
246346
Fusobacteriota
TTT
Lys
>WENV180728207
ODGU01031633
45759
Fusobacteriota
TAA
Leu
>WENV180728853
ODGU01108716
346237
Fusobacteriota
TTC
Glu
>WENV180728314
ODGU01038282
346237
Fusobacteriota
TTC
Glu
>WENV180728213
ODGU01031633
346237
Fusobacteriota
TTC
Glu
>WENV180728600
ODGU01068402
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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