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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180726407
ODGU01000011
81880
Gammaproteobacteria
GAG
Leu
>WENV180726941
ODGU01001137
81880
Gammaproteobacteria
GAG
Leu
>WENV180726461
ODGU01000034
23435
Gammaproteobacteria
TGA
Ser
>WENV180728147
ODGU01027582
238438
Gammaproteobacteria
>WENV180728171
ODGU01028771
238438
Gammaproteobacteria
>WENV180728172
ODGU01028771
238438
Gammaproteobacteria
>WENV180726538
ODGU01000083
103428
Gammaproteobacteria
TAG
Leu
>WENV180727324
ODGU01004316
3276
Gammaproteobacteria
>WENV180727501
ODGU01006424
80672
Gammaproteobacteria
GAG
Leu
>WENV180727813
ODGU01012855
145168
Gammaproteobacteria
CAT
Met
>WENV180726966
ODGU01001274
145168
Gammaproteobacteria
CAT
Met
>WENV180728075
ODGU01023438
23436
Gammaproteobacteria
GGA
Ser
>WENV180727243
ODGU01003431
23436
Gammaproteobacteria
GGA
Ser
>WENV180728012
ODGU01019822
150561
Gammaproteobacteria
ACG
Arg
>WENV180729289
ODGU01321588
339913
Gammaproteobacteria
TTT
Lys
>WENV180727535
ODGU01007105
254333
Gammaproteobacteria
TGT
Thr
>WENV180726419
ODGU01000017
254333
Gammaproteobacteria
TGT
Thr
>WENV180727537
ODGU01007105
358575
Gammaproteobacteria
TCC
Gly
>WENV180726421
ODGU01000017
358575
Gammaproteobacteria
TCC
Gly
>WENV180727667
ODGU01009323
58828
Gammaproteobacteria
TAA
Leu
>WENV180726637
ODGU01000220
58828
Gammaproteobacteria
TAA
Leu
>WENV180726393
ODGU01000007
58828
Gammaproteobacteria
TAA
Leu
>WENV180727850
ODGU01013863
8480
Gammaproteobacteria
GCT
Ser
>WENV180728263
ODGU01034579
3278
Gammaproteobacteria
>WENV180727733
ODGU01010944
3278
Gammaproteobacteria
>WENV180727265
ODGU01003649
3278
Gammaproteobacteria
>WENV180727269
ODGU01003677
147498
Gammaproteobacteria
GAC
Val
>WENV180727070
ODGU01001926
147498
Gammaproteobacteria
GAC
Val
>WENV180726465
ODGU01000034
268376
Gammaproteobacteria
CTT
Lys
>WENV180729317
ODGU01330901
147761
Gammaproteobacteria
TGG
Pro
>WENV180729234
ODGU01273582
147761
Gammaproteobacteria
TGG
Pro
>WENV180728985
ODGU01142044
147761
Gammaproteobacteria
TGG
Pro
>WENV180728890
ODGU01116813
147761
Gammaproteobacteria
TGG
Pro
>WENV180728828
ODGU01102741
147761
Gammaproteobacteria
TGG
Pro
>WENV180728605
ODGU01069253
147761
Gammaproteobacteria
TGG
Pro
>WENV180728270
ODGU01035015
147761
Gammaproteobacteria
TGG
Pro
>WENV180727252
ODGU01003479
147761
Gammaproteobacteria
TGG
Pro
>WENV180726634
ODGU01000219
147761
Gammaproteobacteria
TGG
Pro
>WENV180726551
ODGU01000093
147761
Gammaproteobacteria
TGG
Pro
>WENV180728636
ODGU01073014
59415
Gammaproteobacteria
TAA
Leu
>WENV180728989
ODGU01143984
147499
Gammaproteobacteria
CTT
Lys
>WENV180728675
ODGU01076336
147499
Gammaproteobacteria
CTT
Lys
>WENV180726886
ODGU01000914
147499
Gammaproteobacteria
CTT
Lys
>WENV180727920
ODGU01016116
24813
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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