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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180781624
ODIP01001325
243647
Bacillota
TTT
Lys
>WENV180781760
ODIP01003195
243647
Bacillota
TTT
Lys
>WENV180782168
ODIP01028480
178679
Bacillota
CAT
Met
>WENV180782244
ODIP01044528
16842
Bacillota
CGA
Ser
>WENV180782008
ODIP01012531
242961
Bacillota
GGT
Thr
>WENV180782118
ODIP01022279
308424
Bacillota
TTT
Lys
>WENV180781865
ODIP01006579
391536
Bacillota
TTC
Glu
>WENV180782361
ODIP01118973
391536
Bacillota
TTC
Glu
>WENV180781916
ODIP01008043
16834
Bacillota
GCT
Ser
>WENV180781507
ODIP01000408
114002
Bacillota
CAA
Leu
>WENV180782362
ODIP01118973
243612
Bacillota
TAC
Val
>WENV180781866
ODIP01006579
243612
Bacillota
TAC
Val
>WENV180781537
ODIP01000592
95581
Bacillota
CAG
Leu
>WENV180782028
ODIP01013984
338676
Bacillota
CCG
Arg
>WENV180781449
ODIP01000092
338676
Bacillota
CCG
Arg
>WENV180781466
ODIP01000154
147135
Bacillota
ACG
Arg
>WENV180782172
ODIP01028480
242848
Bacillota
GAA
Phe
>WENV180781451
ODIP01000111
190275
Bacillota
TCT
Arg
>WENV180781653
ODIP01001632
194150
Bacillota
TGG
Pro
>WENV180781851
ODIP01006067
235197
Bacillota
GTC
Asp
>WENV180781753
ODIP01003160
235197
Bacillota
GTC
Asp
>WENV180781755
ODIP01003160
368876
Bacillota
GCC
Gly
>WENV180781622
ODIP01001325
368876
Bacillota
GCC
Gly
>WENV180781483
ODIP01000236
79349
Bacillota
CAA
Leu
>WENV180781758
ODIP01003195
243613
Bacillota
GTG
His
>WENV180781730
ODIP01002695
152491
Bacillota
CAT
Met
>WENV180781726
ODIP01002695
273029
Bacillota
TGT
Thr
>WENV180781729
ODIP01002695
281472
Bacillota
GGT
Thr
>WENV180781655
ODIP01001632
178024
Bacillota
TCT
Arg
>WENV180781684
ODIP01001990
315448
Bacillota
GGT
Thr
>WENV180781511
ODIP01000426
413657
Bacillota
CCC
Gly
>WENV180781918
ODIP01008078
287034
Bacillota
GTT
Asn
>WENV180781623
ODIP01001325
287034
Bacillota
GTT
Asn
>WENV180781759
ODIP01003195
343027
Bacillota
TTG
Gln
>WENV180782275
ODIP01055022
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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