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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180798032
ODJB01220414
256200
Betaproteobacteria
CGT
Thr
>WENV180797496
ODJB01066650
155690
Betaproteobacteria
TCT
Arg
>WENV180795853
ODJB01000419
97609
Betaproteobacteria
CAA
Leu
>WENV180796426
ODJB01004715
97609
Betaproteobacteria
CAA
Leu
>WENV180796745
ODJB01012239
17412
Betaproteobacteria
GGA
Ser
>WENV180798349
ODJB01435215
159509
Betaproteobacteria
CAT
Met
>WENV180798142
ODJB01290693
58732
Betaproteobacteria
CAG
Leu
>WENV180797090
ODJB01028847
62536
Betaproteobacteria
CAG
Leu
>WENV180796430
ODJB01004757
412095
Betaproteobacteria
GCA
Cys
>WENV180796211
ODJB01002013
412095
Betaproteobacteria
GCA
Cys
>WENV180798383
ODJB01443777
235250
Betaproteobacteria
>WENV180797382
ODJB01052710
235250
Betaproteobacteria
>WENV180796103
ODJB01001341
235250
Betaproteobacteria
>WENV180796452
ODJB01004952
95890
Betaproteobacteria
CAA
Leu
>WENV180798104
ODJB01259254
144721
Betaproteobacteria
GTC
Asp
>WENV180795851
ODJB01000419
149294
Betaproteobacteria
TCT
Arg
>WENV180797460
ODJB01063191
240188
Betaproteobacteria
GAA
Phe
>WENV180796398
ODJB01004338
240188
Betaproteobacteria
GAA
Phe
>WENV180795983
ODJB01000857
240188
Betaproteobacteria
GAA
Phe
>WENV180795815
ODJB01000329
240188
Betaproteobacteria
GAA
Phe
>WENV180796960
ODJB01021695
155338
Betaproteobacteria
>WENV180796959
ODJB01021695
155338
Betaproteobacteria
>WENV180796958
ODJB01021695
155338
Betaproteobacteria
>WENV180795913
ODJB01000561
155338
Betaproteobacteria
>WENV180796579
ODJB01007380
352197
Betaproteobacteria
GGT
Thr
>WENV180797244
ODJB01039962
16424
Betaproteobacteria
GGA
Ser
>WENV180796937
ODJB01020790
16424
Betaproteobacteria
GGA
Ser
>WENV180796031
ODJB01001052
16424
Betaproteobacteria
GGA
Ser
>WENV180796750
ODJB01012529
358597
Betaproteobacteria
CCT
Arg
>WENV180795830
ODJB01000365
358597
Betaproteobacteria
CCT
Arg
>WENV180797695
ODJB01103021
238786
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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