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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180837684
ODKG01006220
235146
Actinomycetota
CGT
Thr
>WENV180837998
ODKG01019835
235347
Actinomycetota
GGC
Ala
>WENV180838105
ODKG01030298
235347
Actinomycetota
GGC
Ala
>WENV180837500
ODKG01003799
235153
Actinomycetota
CCT
Arg
>WENV180838575
ODKG01135445
16400
Actinomycetota
GAG
Leu
>WENV180838249
ODKG01048613
37070
Actinomycetota
CGA
Ser
>WENV180838122
ODKG01032796
201717
Actinomycetota
CTT
Lys
>WENV180838050
ODKG01024534
144600
Actinomycetota
TGG
Pro
>WENV180838092
ODKG01029197
273786
Actinomycetota
CGT
Thr
>WENV180838127
ODKG01033642
245301
Actinomycetota
GCC
Gly
>WENV180837715
ODKG01006829
245301
Actinomycetota
GCC
Gly
>WENV180838320
ODKG01059933
411601
Actinomycetota
CCC
Gly
>WENV180838219
ODKG01045091
16219
Actinomycetota
GCT
Ser
>WENV180838095
ODKG01029491
235174
Actinomycetota
TGC
Ala
>WENV180838009
ODKG01020349
356045
Actinomycetota
GAC
Val
>WENV180837750
ODKG01007581
153948
Actinomycetota
GGG
Pro
>WENV180838771
ODKG01254381
44855
Actinomycetota
TGA
Ser
>WENV180837956
ODKG01016782
145345
Actinomycetota
TAC
Val
>WENV180838376
ODKG01070943
44862
Actinomycetota
CGA
Ser
>WENV180838464
ODKG01096655
413665
Actinomycetota
TTG
Gln
>WENV180838334
ODKG01063665
254857
Actinomycetota
CCG
Arg
>WENV180838235
ODKG01046845
144593
Actinomycetota
TAT
Ile
>WENV180838687
ODKG01185413
144700
Actinomycetota
CAT
Met
>WENV180838000
ODKG01019890
238473
Actinomycetota
GTG
His
>WENV180838422
ODKG01086617
144636
Actinomycetota
GAT
Ile
>WENV180838002
ODKG01020092
295695
Actinomycetota
CTC
Glu
>WENV180838003
ODKG01020092
338148
Actinomycetota
CTG
Gln
>WENV180838800
ODKG01257707
235148
Actinomycetota
GTT
Asn
>WENV180838025
ODKG01021958
53078
Actinomycetota
GGA
Ser
>WENV180838021
ODKG01021839
113702
Actinomycetota
TAA
Leu
>WENV180838224
ODKG01046009
144825
Actinomycetota
CAT
Met
>WENV180837489
ODKG01003683
338139
Actinomycetota
GTT
Asn
>WENV180837488
ODKG01003683
338139
Actinomycetota
GTT
Asn
>WENV180837881
ODKG01012618
235348
Actinomycetota
CCT
Arg
>WENV180837900
ODKG01013388
411554
Actinomycetota
CCC
Gly
>WENV180838515
ODKG01107018
113601
Actinomycetota
TAG
Leu
>WENV180838093
ODKG01029197
113601
Actinomycetota
TAG
Leu
>WENV180838011
ODKG01020352
144595
Actinomycetota
CAA
Leu
>WENV180838271
ODKG01051210
235149
Actinomycetota
CCT
Arg
>WENV180838713
ODKG01203619
51286
Actinomycetota
TGA
Ser
>WENV180837692
ODKG01006435
414234
Actinomycetota
CTG
Gln
>WENV180838015
ODKG01021052
235121
Actinomycetota
CGT
Thr
>WENV180838368
ODKG01069727
61501
Actinomycetota
CAG
Leu
>WENV180838396
ODKG01077138
80622
Actinomycetota
CAG
Leu
>WENV180838664
ODKG01171038
44851
Actinomycetota
TGA
Ser
>WENV180838076
ODKG01026821
16222
Actinomycetota
GAG
Leu
>WENV180837201
ODKG01001552
158513
Actinomycetota
TGG
Pro
>WENV180838100
ODKG01030035
243162
Actinomycetota
GTT
Asn
>WENV180838194
ODKG01041734
144660
Actinomycetota
TAC
Val
>WENV180838214
ODKG01044058
95593
Actinomycetota
>WENV180838051
ODKG01024568
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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