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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181066642
ODZI01000652
411654
Campylobacterota
GCA
Cys
>WENV181067811
ODZI01058012
411654
Campylobacterota
GCA
Cys
>WENV181067812
ODZI01058012
23937
Campylobacterota
TGA
Ser
>WENV181066643
ODZI01000652
44891
Campylobacterota
TGA
Ser
>WENV181067947
ODZI01078056
238560
Campylobacterota
TTT
Lys
>WENV181067076
ODZI01005864
243184
Campylobacterota
GAC
Val
>WENV181067557
ODZI01025834
243184
Campylobacterota
GAC
Val
>WENV181067205
ODZI01009048
237494
Campylobacterota
CTT
Lys
>WENV181067362
ODZI01014740
237494
Campylobacterota
CTT
Lys
>WENV181067948
ODZI01078056
238561
Campylobacterota
CTC
Glu
>WENV181067608
ODZI01029992
162606
Campylobacterota
CCT
Arg
>WENV181066648
ODZI01000654
338365
Campylobacterota
GGT
Thr
>WENV181066904
ODZI01003286
353400
Campylobacterota
CTC
Glu
>WENV181067870
ODZI01064390
146879
Campylobacterota
CAT
Met
>WENV181067228
ODZI01009649
146879
Campylobacterota
CAT
Met
>WENV181066646
ODZI01000654
95644
Campylobacterota
GTA
Tyr
>WENV181067019
ODZI01004875
149516
Campylobacterota
CAT
Met
>WENV181068056
ODZI01111840
146881
Campylobacterota
TCG
Arg
>WENV181067810
ODZI01058012
60256
Campylobacterota
TAA
Leu
>WENV181066840
ODZI01002369
145013
Campylobacterota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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