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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181220706
OFCS01000055
119475
Actinomycetota
TAA
Leu
>WENV181220869
OFCS01001712
413566
Actinomycetota
CCC
Gly
>WENV181220769
OFCS01000164
235347
Actinomycetota
GGC
Ala
>WENV181220646
OFCS01000005
166493
Actinomycetota
CTT
Lys
>WENV181220683
OFCS01000030
144589
Actinomycetota
ACG
Arg
>WENV181220764
OFCS01000143
37070
Actinomycetota
CGA
Ser
>WENV181220734
OFCS01000091
144600
Actinomycetota
TGG
Pro
>WENV181220665
OFCS01000019
235092
Actinomycetota
CCG
Arg
>WENV181220768
OFCS01000158
235194
Actinomycetota
GTG
His
>WENV181220727
OFCS01000086
273786
Actinomycetota
CGT
Thr
>WENV181220770
OFCS01000164
158720
Actinomycetota
ACG
Arg
>WENV181220953
OFCS01006759
245301
Actinomycetota
GCC
Gly
>WENV181220686
OFCS01000032
144826
Actinomycetota
GGG
Pro
>WENV181220692
OFCS01000033
23370
Actinomycetota
GCT
Ser
>WENV181220651
OFCS01000010
174149
Actinomycetota
GAT
Ile
>WENV181220637
OFCS01000001
338239
Actinomycetota
TTC
Glu
>WENV181220789
OFCS01000241
162208
Actinomycetota
TAC
Val
>WENV181220675
OFCS01000027
16219
Actinomycetota
GCT
Ser
>WENV181220652
OFCS01000010
235174
Actinomycetota
TGC
Ala
>WENV181220645
OFCS01000005
235101
Actinomycetota
TTT
Lys
>WENV181220786
OFCS01000223
121510
Actinomycetota
TAA
Leu
>WENV181220762
OFCS01000143
144625
Actinomycetota
GTC
Asp
>WENV181220924
OFCS01002942
153948
Actinomycetota
GGG
Pro
>WENV181220700
OFCS01000047
145345
Actinomycetota
TAC
Val
>WENV181220689
OFCS01000033
235199
Actinomycetota
CAC
Val
>WENV181220641
OFCS01000003
367535
Actinomycetota
CTG
Gln
>WENV181220733
OFCS01000091
413665
Actinomycetota
TTG
Gln
>WENV181220632
OFCS01000001
45154
Actinomycetota
TGA
Ser
>WENV181220647
OFCS01000005
254857
Actinomycetota
CCG
Arg
>WENV181220724
OFCS01000081
16223
Actinomycetota
GAG
Leu
>WENV181220699
OFCS01000046
144593
Actinomycetota
TAT
Ile
>WENV181220691
OFCS01000033
144700
Actinomycetota
CAT
Met
>WENV181220936
OFCS01003682
144636
Actinomycetota
GAT
Ile
>WENV181220659
OFCS01000016
243671
Actinomycetota
CTC
Glu
>WENV181220640
OFCS01000003
243671
Actinomycetota
CTC
Glu
>WENV181220680
OFCS01000027
98279
Actinomycetota
GTA
Tyr
>WENV181220660
OFCS01000016
338148
Actinomycetota
CTG
Gln
>WENV181220772
OFCS01000174
235148
Actinomycetota
GTT
Asn
>WENV181220685
OFCS01000032
235148
Actinomycetota
GTT
Asn
>WENV181220792
OFCS01000258
235148
Actinomycetota
GTT
Asn
>WENV181220791
OFCS01000258
235148
Actinomycetota
GTT
Asn
>WENV181220793
OFCS01000259
176456
Actinomycetota
TCT
Arg
>WENV181220635
OFCS01000001
144825
Actinomycetota
CAT
Met
>WENV181220639
OFCS01000003
412399
Actinomycetota
CCC
Gly
>WENV181220636
OFCS01000001
235348
Actinomycetota
CCT
Arg
>WENV181220750
OFCS01000117
411554
Actinomycetota
CCC
Gly
>WENV181220728
OFCS01000086
113601
Actinomycetota
TAG
Leu
>WENV181220677
OFCS01000027
113601
Actinomycetota
TAG
Leu
>WENV181220735
OFCS01000091
144595
Actinomycetota
CAA
Leu
>WENV181220707
OFCS01000055
144595
Actinomycetota
CAA
Leu
>WENV181220810
OFCS01000404
145343
Actinomycetota
GGG
Pro
>WENV181220751
OFCS01000121
235149
Actinomycetota
CCT
Arg
>WENV181220946
OFCS01005644
414234
Actinomycetota
CTG
Gln
>WENV181220676
OFCS01000027
235121
Actinomycetota
CGT
Thr
>WENV181220644
OFCS01000005
47164
Actinomycetota
GGA
Ser
>WENV181220708
OFCS01000055
144635
Actinomycetota
TGG
Pro
>WENV181220868
OFCS01001666
240124
Actinomycetota
CGT
Thr
>WENV181220631
OFCS01000001
45852
Actinomycetota
CGA
Ser
>WENV181220749
OFCS01000117
80622
Actinomycetota
CAG
Leu
>WENV181220642
OFCS01000003
80622
Actinomycetota
CAG
Leu
>WENV181220765
OFCS01000143
44851
Actinomycetota
TGA
Ser
>WENV181220682
OFCS01000029
16222
Actinomycetota
GAG
Leu
>WENV181220656
OFCS01000015
235173
Actinomycetota
GGC
Ala
>WENV181220684
OFCS01000032
243162
Actinomycetota
GTT
Asn
>WENV181220687
OFCS01000033
278447
Actinomycetota
GTG
His
>WENV181220690
OFCS01000033
95593
Actinomycetota
>WENV181220757
OFCS01000130
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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