tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = TCG

HIT: 21 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.272265 (20 seq.)
>W131157527 AQSK01000112 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-E13 [AQSK] 10829 10753 - Arg TCG [ENA]
>W131157610 AQSM01000086 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N14 [AQSM] 10216 10140 - Arg TCG [ENA]
>W131192147 ASKO01000053 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-M08 [ASKO] 263 339 + Arg TCG [ENA]
>W131192157 ASKP01000060 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-L05 [ASKP] 4346 4270 - Arg TCG [ENA]
>W131192185 ASKQ01000098 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-O17 [ASKQ] 1297 1373 + Arg TCG [ENA]
>W131192965 ASNI01000001 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-N17 [ASNI] 10392 10316 - Arg TCG [ENA]
>W131193153 ASNQ01000061 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-K16 [ASNQ] 256 332 + Arg TCG [ENA]
>W131193158 ASNR01000019 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-L13 [ASNR] 5724 5800 + Arg TCG [ENA]
>W131193201 ASNT01000040 candidate division KSB1 candidate division KSB1 bacterium SCGC AAA252-P10 [ASNT] 10384 10308 - Arg TCG [ENA]
>W141139682 AWNX01000021 Cloacimonetes Cloacimonetes bacterium JGI OTU-1 [AWNX] 10640 10564 - Arg TCG [ENA]
>WENV170624764 FUWD013186367 [FUWD] metagenome; unknown 1206 1130 - Arg TCG [ENA]
>WENV170633040 FUWD013390449 [FUWD] metagenome; unknown 1206 1130 - Arg TCG [ENA]
>SRA1025550 SRR035085.37500 454 Sequencing (SRP001806) 401 325 - Arg TCG [SRA]
>SRA1025886 SRR035085.102782 454 Sequencing (SRP001806) 402 326 - Arg TCG [SRA]
>SRA1025972 SRR035085.119514 454 Sequencing (SRP001806) 403 327 - Arg TCG [SRA]
>SRA1031126 SRR035087.377529 454 Sequencing (SRP001808) 274 198 - Arg TCG [SRA]
>SRA1032700 SRR035088.82055 454 Sequencing (SRP001809) 91 15 - Arg TCG [SRA]
>SRA1033378 SRR035088.239777 454 Sequencing (SRP001809) 149 73 - Arg TCG [SRA]
>SRA1048754 SRR035094.241714 454 Sequencing (SRP001815) 32 108 + Arg TCG [SRA]
>SRA1048869 SRR035094.267796 454 Sequencing (SRP001815) 32 108 + Arg TCG [SRA]
Identical group No.272297 (1 seq.)
>SRA1025738 SRR035085.73644 454 Sequencing (SRP001806) 5 81 + Arg TCG [SRA]
Identical group No.272300 (7 seq.)
>WENV170621492 FUWD013061040 [FUWD] metagenome; unknown 1638 1564 - Arg TCG [ENA]
>WENV170629674 FUWD013277251 [FUWD] metagenome; unknown 1638 1564 - Arg TCG [ENA]
>SRA1025744 SRR035085.74740 454 Sequencing (SRP001806) 311 237 - Arg TCG [SRA]
>SRA1025947 SRR035085.114996 454 Sequencing (SRP001806) 335 261 - Arg TCG [SRA]
>SRA1042195 SRR035091.352397 454 Sequencing (SRP001812) 157 83 - Arg TCG [SRA]
>SRA1042317 SRR035091.371473 454 Sequencing (SRP001812) 402 476 + Arg TCG [SRA]
>SRA1044190 SRR035092.238943 454 Sequencing (SRP001813) 162 236 + Arg TCG [SRA]
Identical group No.272351 (7 seq.)
>W1710798584 LJTR01000233 Planctomycetes Phycisphaerae bacterium SG8_4 (LJTR) 3471 3396 - Arg TCG [ENA]
>WENV181413813 OGCK01142725 [OGCK] hot springs metagenome; hot spring sediment 337 413 + Arg TCG [ENA]
>WENV183514694 OMKS01028152 [OMKS] sediment metagenome; hot spring sediment 270 345 + Arg TCG [ENA]
>WENV170017883 BARU01036979 [BARU] marine sediment metagenome; marine subsurface sediment at 18.6 meters below seafloor (mbsf), off the Shimokita Peninsula 155 80 - Arg TCG [ENA]
>WENV170018213 BARV01025848 [BARV] marine sediment metagenome; marine subsurface sediment at 48.5 meters below seafloor (mbsf), off the Shimokita Peninsula 465 540 + Arg TCG [ENA]
>SRA1026067 SRR035085.135785 454 Sequencing (SRP001806) 144 69 - Arg TCG [SRA]
>W1610662541 LJTR01000233 Planctomycetes Phycisphaerae bacterium SG8_4 (LJTR) 3471 3396 - Arg TCG [ENA]
Identical group No.272371 (4 seq.)
>WENV170605053 FUWD010444611 [FUWD] metagenome; unknown 322 398 + Arg TCG [ENA]
>SRA1026213 SRR035085.164241 454 Sequencing (SRP001806) 239 315 + Arg TCG [SRA]
>SRA1026420 SRR035085.203766 454 Sequencing (SRP001806) 238 314 + Arg TCG [SRA]
>SRA1026636 SRR035085.246078 454 Sequencing (SRP001806) 129 53 - Arg TCG [SRA]
Identical group No.272400 (1 seq.)
>SRA1026397 SRR035085.201219 454 Sequencing (SRP001806) 157 231 + Arg TCG [SRA]
Identical group No.272401 (6 seq.)
>WENV170601162 FUWD010159189 [FUWD] metagenome; unknown 349 425 + Arg TCG [ENA]
>SRA1026400 SRR035085.201976 454 Sequencing (SRP001806) 428 352 - Arg TCG [SRA]
>SRA1031826 SRR035087.495309 454 Sequencing (SRP001808) 152 228 + Arg TCG [SRA]
>SRA1034912 SRR035089.196324 454 Sequencing (SRP001810) 349 425 + Arg TCG [SRA]
>SRA1035872 SRR035089.392884 454 Sequencing (SRP001810) 291 215 - Arg TCG [SRA]
>SRA1036444 SRR035089.525036 454 Sequencing (SRP001810) 89 165 + Arg TCG [SRA]
Identical group No.272434 (1 seq.)
>SRA1026569 SRR035085.229938 454 Sequencing (SRP001806) 45 118 + Arg TCG [SRA]
Identical group No.272449 (23 seq.)
>WENV181413199 OGCK01038251 [OGCK] hot springs metagenome; hot spring sediment 853 929 + Arg TCG [ENA]
>WENV170616588 FUWD012892690 [FUWD] metagenome; unknown 15 91 + Arg TCG [ENA]
>WENV170617548 FUWD012929501 [FUWD] metagenome; unknown 109 185 + Arg TCG [ENA]
>WENV170620355 FUWD013030264 [FUWD] metagenome; unknown 1996 1920 - Arg TCG [ENA]
>WENV170624202 FUWD013177659 [FUWD] metagenome; unknown 348 272 - Arg TCG [ENA]
>WENV170625247 FUWD013194035 [FUWD] metagenome; unknown 2626 2702 + Arg TCG [ENA]
>WENV170628492 FUWD013247842 [FUWD] metagenome; unknown 1996 1920 - Arg TCG [ENA]
>WENV170632485 FUWD013383366 [FUWD] metagenome; unknown 348 272 - Arg TCG [ENA]
>WENV170633492 FUWD013396979 [FUWD] metagenome; unknown 2626 2702 + Arg TCG [ENA]
>SRA1017972 SRR035082.223176 454 Sequencing (SRP001803) 380 304 - Arg TCG [SRA]
>SRA1018286 SRR035082.269545 454 Sequencing (SRP001803) 15 91 + Arg TCG [SRA]
>SRA1018874 SRR035082.361764 454 Sequencing (SRP001803) 241 165 - Arg TCG [SRA]
>SRA1026645 SRR035085.248989 454 Sequencing (SRP001806) 237 161 - Arg TCG [SRA]
>SRA1029242 SRR035087.96635 454 Sequencing (SRP001808) 294 370 + Arg TCG [SRA]
>SRA1029647 SRR035087.156066 454 Sequencing (SRP001808) 139 63 - Arg TCG [SRA]
>SRA1029823 SRR035087.187552 454 Sequencing (SRP001808) 310 234 - Arg TCG [SRA]
>SRA1034567 SRR035089.124575 454 Sequencing (SRP001810) 148 72 - Arg TCG [SRA]
>SRA1034574 SRR035089.126691 454 Sequencing (SRP001810) 274 350 + Arg TCG [SRA]
>SRA1035940 SRR035089.409818 454 Sequencing (SRP001810) 142 66 - Arg TCG [SRA]
>SRA1048204 SRR035094.128844 454 Sequencing (SRP001815) 243 319 + Arg TCG [SRA]
>SRA1049069 SRR035095.14204 454 Sequencing (SRP001816) 147 223 + Arg TCG [SRA]
>SRA1049559 SRR035095.95725 454 Sequencing (SRP001816) 119 195 + Arg TCG [SRA]
>SRA1050302 SRR035095.234322 454 Sequencing (SRP001816) 377 453 + Arg TCG [SRA]
Identical group No.272458 (4 seq.)
>WENV170623410 FUWD013150272 [FUWD] metagenome; unknown 429 502 + Arg TCG [ENA]
>WENV170631679 FUWD013361346 [FUWD] metagenome; unknown 429 502 + Arg TCG [ENA]
>SRA1026675 SRR035085.255288 454 Sequencing (SRP001806) 39 112 + Arg TCG [SRA]
>SRA1026777 SRR035085.287923 454 Sequencing (SRP001806) 142 215 + Arg TCG [SRA]
Identical group No.272464 (21 seq.)
>W1710802226 LJXT01000029 Bacteroidetes Algoriphagus marincola HL-49 (LJXT) 1777 1853 + Arg TCG [ENA]
>W131211899 ATNM01000049 Bacteroidetes Cyclobacterium qasimii M12-11B [ATNM] 51082 51158 + Arg TCG [ENA]
>W131223105 AUBU01000010 Bacteroidetes Algoriphagus marincola DSM 16067 [AUBU] 241704 241780 + Arg TCG [ENA]
>W131223197 AUBX01000009 Bacteroidetes Algoriphagus vanfongensis DSM 17529 [AUBX] 858814 858890 + Arg TCG [ENA]
>W1711707969 MSSX01000032 Bacteroidetes Algoriphagus faecimaris (MSSX) 23948 23872 - Arg TCG [ENA]
>W141039126 ALWO02000023 Bacteroidetes Indibacter alkaliphilus LW1 [ALWO] 258103 258027 - Arg TCG [ENA]
>WENV181233756 OFET01000074 [OFET] microbial mat metagenome; enrichment culture HLUCC-A from microbial mat sample; contains cyanobacterium Phormidesmis 55134 55060 - Arg TCG [ENA]
>WENV181234787 OFEU01008936 [OFEU] microbial mat metagenome; enrichment culture HLUCC-O from microbial mat sample; contains cyanobacterium Phormidium 548 474 - Arg TCG [ENA]
>W141278901 JAFX01000001 Bacteroidetes Algoriphagus marincola HL-49 [JAFX] 1494303 1494379 + Arg TCG [ENA]
>WENV183748105 PPFU01011660 [PPFU] hypolithon metagenome; Antarctic Hypolithon 875 949 + Arg TCG [ENA]
>WENV170192624 CEPF01037761 [CEPF] marine metagenome genome assembly TARA_039_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 2083 2009 - Arg TCG [ENA]
>WENV170408982 CEUI01125135 [CEUI] marine metagenome genome assembly TARA_125_MIX_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 756 682 - Arg TCG [ENA]
>WENV170991978 MWWA01398069 [MWWA] soil metagenome; MS5-1 sample; Antarctic (ecotone) soil 140 66 - Arg TCG [ENA]
>WENV170994605 MWWE01014785 [MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil 81 5 - Arg TCG [ENA]
>WENV170995009 MWWE01116630 [MWWE] soil metagenome; MS1-1 sample; Antarctic (ecotone) soil 306 230 - Arg TCG [ENA]
>W1910932878 NIUC01000001 Bacteroidetes Algoriphagus sp. XAY3209 (NIUC) 45866 45792 - Arg TCG [ENA]
>SRA1026701 SRR035085.263994 454 Sequencing (SRP001806) 316 240 - Arg TCG [SRA]
>W1610666083 LJXT01000029 Bacteroidetes Algoriphagus marincola HL-49 (LJXT) 1777 1853 + Arg TCG [ENA]
>W1710513395 FNAC01000031 Bacteroidetes Algoriphagus faecimaris (FNAC) 32985 33061 + Arg TCG [ENA]
>W1710562672 FOPC01000014 Bacteroidetes Algoriphagus hitonicola (FOPC) 15220 15296 + Arg TCG [ENA]
>W1710571382 FOVW01000002 Bacteroidetes Algoriphagus ornithinivorans (FOVW) 92792 92718 - Arg TCG [ENA]
Identical group No.272465 (9 seq.)
>WENV170623352 FUWD013147340 [FUWD] metagenome; unknown 840 764 - Arg TCG [ENA]
>WENV170626664 FUWD013228152 [FUWD] metagenome; unknown 137 213 + Arg TCG [ENA]
>WENV170626684 FUWD013228563 [FUWD] metagenome; unknown 466 390 - Arg TCG [ENA]
>WENV170631617 FUWD013358875 [FUWD] metagenome; unknown 840 764 - Arg TCG [ENA]
>SRA1018467 SRR035082.295875 454 Sequencing (SRP001803) 466 390 - Arg TCG [SRA]
>SRA1018647 SRR035082.327414 454 Sequencing (SRP001803) 137 213 + Arg TCG [SRA]
>SRA1026702 SRR035085.264160 454 Sequencing (SRP001806) 274 198 - Arg TCG [SRA]
>SRA1026797 SRR035085.292878 454 Sequencing (SRP001806) 274 198 - Arg TCG [SRA]
>SRA1035792 SRR035089.375895 454 Sequencing (SRP001810) 342 266 - Arg TCG [SRA]
Identical group No.272475 (5 seq.)
>WENV170537773 CEWR01027719 [CEWR] marine metagenome genome assembly TARA_085_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 181 257 + Arg TCG [ENA]
>WENV170818599 MDSX01075076 [MDSX] marine metagenome; seawater 1608 1684 + Arg TCG [ENA]
>WENV170935401 MDTG01256027 [MDTG] marine metagenome; seawater 3974 3898 - Arg TCG [ENA]
>SRA1026749 SRR035085.279678 454 Sequencing (SRP001806) 112 188 + Arg TCG [SRA]
>WENV056746 AACY023264245 Marine microbial communities from Global Ocean Sampling (GOS) 515 593 + Arg TCG [ENA]
Identical group No.272477 (3 seq.)
>WENV170611541 FUWD012344661 [FUWD] metagenome; unknown 202 128 - Arg TCG [ENA]
>SRA1026754 SRR035085.280379 454 Sequencing (SRP001806) 157 231 + Arg TCG [SRA]
>SRA1026831 SRR035085.305753 454 Sequencing (SRP001806) 159 233 + Arg TCG [SRA]
Identical group No.453286 (2 seq.)
>SRA1025807 SRR035085.86962 454 Sequencing (SRP001806) 136 61 - Arg TCG [SRA]
>SRA1025829 SRR035085.89583 454 Sequencing (SRP001806) 134 59 - Arg TCG [SRA]
Identical group No.453320 (1 seq.)
>SRA1025970 SRR035085.119443 454 Sequencing (SRP001806) 211 139 - Arg TCG [SRA]
Identical group No.453335 (2 seq.)
>WENV170611862 FUWD012421919 [FUWD] metagenome; unknown 199 124 - Arg TCG [ENA]
>SRA1026061 SRR035085.134718 454 Sequencing (SRP001806) 209 134 - Arg TCG [SRA]
Identical group No.654322 (4 seq.)
>WENV170605097 FUWD010449171 [FUWD] metagenome; unknown 264 335 + Arg TCG [ENA]
>SRA1026144 SRR035085.153138 454 Sequencing (SRP001806) 322 251 - Arg TCG [SRA]
>SRA1030704 SRR035087.317213 454 Sequencing (SRP001808) 264 335 + Arg TCG [SRA]
>SRA1031838 SRR035087.498115 454 Sequencing (SRP001808) 264 335 + Arg TCG [SRA]
Identical group No.654406 (4 seq.)
>WENV170611911 FUWD012436366 [FUWD] metagenome; unknown 135 206 + Arg TCG [ENA]
>SRA1016959 SRR035082.60852 454 Sequencing (SRP001803) 50 121 + Arg TCG [SRA]
>SRA1026770 SRR035085.285388 454 Sequencing (SRP001806) 145 216 + Arg TCG [SRA]
>SRA1029412 SRR035087.122875 454 Sequencing (SRP001808) 391 462 + Arg TCG [SRA]
Identical group No.654661 (4 seq.)
>WENV170607857 FUWD010861866 [FUWD] metagenome; unknown 106 35 - Arg TCG [ENA]
>SRA1018591 SRR035082.316876 454 Sequencing (SRP001803) 93 22 - Arg TCG [SRA]
>SRA1026375 SRR035085.195348 454 Sequencing (SRP001806) 116 45 - Arg TCG [SRA]
>SRA1031765 SRR035087.484451 454 Sequencing (SRP001808) 332 261 - Arg TCG [SRA]
Identical group No.779808 (3 seq.)
>WENV170611854 FUWD012420215 [FUWD] metagenome; unknown 161 89 - Arg TCG [ENA]
>SRA1025973 SRR035085.119658 454 Sequencing (SRP001806) 171 99 - Arg TCG [SRA]
>SRA1026260 SRR035085.174319 454 Sequencing (SRP001806) 172 100 - Arg TCG [SRA]
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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