tRNA genes clustered and arranged according to each identical group

454 Sequencing (SRP001806)

Anticodon = TGA

HIT: 9 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.45845 (5 seq.)
>WENV170607841 FUWD010860116 [FUWD] metagenome; unknown 391 302 - Ser TGA [ENA] ¢þ
>WENV170699023 LGVF01462682 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 321 232 - Ser TGA [ENA] ¢þ
>SRA1025812 SRR035085.87840 454 Sequencing (SRP001806) 179 90 - Ser TGA [SRA]
>SRA1034662 SRR035089.146881 454 Sequencing (SRP001810) 75 164 + Ser TGA [SRA]
>SRA1034998 SRR035089.214667 454 Sequencing (SRP001810) 118 29 - Ser TGA [SRA]
Identical group No.45856 (3 seq.)
>WENV170612545 FUWD012632474 [FUWD] metagenome; unknown 182 271 + Ser TGA [ENA] ¢þ
>SRA1018420 SRR035082.289211 454 Sequencing (SRP001803) 174 263 + Ser TGA [SRA]
>SRA1026674 SRR035085.254976 454 Sequencing (SRP001806) 317 228 - Ser TGA [SRA]
Identical group No.45857 (3 seq.)
>SRA1026835 SRR035085.306660 454 Sequencing (SRP001806) 145 57 - Ser TGA [SRA]
>SRA1048227 SRR035094.130419 454 Sequencing (SRP001815) 183 95 - Ser TGA [SRA]
>SRA1048628 SRR035094.211885 454 Sequencing (SRP001815) 183 95 - Ser TGA [SRA]
Identical group No.87033 (2 seq.)
>WENV170626208 FUWD013216469 [FUWD] metagenome; unknown 1028 941 - Ser TGA [ENA] ¢þ
>SRA1026120 SRR035085.147286 454 Sequencing (SRP001806) 434 347 - Ser TGA [SRA]
Identical group No.87042 (8 seq.)
>W131193753 ASOZ01000011 Atribacterota Atribacteria bacterium JGI 0000014-F07 OP9 bacterium JGI 0000014-F07 [ASOZ] 4373 4286 - Ser TGA [ENA] ¡û
>WENV170602334 FUWD010227344 [FUWD] metagenome; unknown 662 749 + Ser TGA [ENA] ¢þ
>SRA1026641 SRR035085.246914 454 Sequencing (SRP001806) 177 90 - Ser TGA [SRA]
>SRA1029421 SRR035087.124831 454 Sequencing (SRP001808) 99 12 - Ser TGA [SRA]
>SRA1048242 SRR035094.133372 454 Sequencing (SRP001815) 91 178 + Ser TGA [SRA]
>SRA1048422 SRR035094.169752 454 Sequencing (SRP001815) 91 178 + Ser TGA [SRA]
>W1510076774 CDPL01000020 Atribacterota Atribacteria bacterium JGI 0000014-F07 [CDPL] 5546 5633 + Ser TGA [ENA] ¡û
>W1510076786 CDPL01000121 Atribacterota Atribacteria bacterium JGI 0000014-F07 [CDPL] 1769 1682 - Ser TGA [ENA] ¡û
Identical group No.87045 (4 seq.)
>WENV170694332 LGVD01036065 [LGVD] marine sediment metagenome; sample #3730, Push core (PC) 16 from cruise R/V Atlantis leg AT-15-68, Alvin dive 4635 at 454 369 - Ser TGA [ENA] ¢þ
>WENV170694717 LGVE01004054 [LGVE] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 448 361 - Ser TGA [ENA] ¢þ
>WENV170698087 LGVF01255943 [LGVF] marine sediment metagenome; combined push core samples #3730, #5133, and #5579 collected at Hydrate Ridge 121 208 + Ser TGA [ENA] ¢þ
>SRA1026679 SRR035085.257548 454 Sequencing (SRP001806) 278 365 + Ser TGA [SRA]
Identical group No.153842 (3 seq.)
>WENV170607829 FUWD010859404 [FUWD] metagenome; unknown 88 171 + Ser TGA [ENA] ¢þ
>SRA1025607 SRR035085.48757 454 Sequencing (SRP001806) 77 160 + Ser TGA [SRA]
>SRA1040563 SRR035091.115634 454 Sequencing (SRP001812) 151 234 + Ser TGA [SRA]
Identical group No.153843 (24 seq.)
>W131157563 AQSK01000206 Unclassified Cloacimonetes bacterium SCGC AAA252-E13 KSB1 bacterium SCGC AAA252-E13 [AQSK] 33832 33917 + Ser TGA [ENA] ¡û
>W131157628 AQSM01000150 Unclassified Cloacimonetes bacterium SCGC AAA252-N14 KSB1 bacterium SCGC AAA252-N14 [AQSM] 467 382 - Ser TGA [ENA] ¡û
>W131192171 ASKQ01000029 Unclassified Cloacimonetes bacterium SCGC AAA252-O17 KSB1 bacterium SCGC AAA252-O17 [ASKQ] 385 300 - Ser TGA [ENA] ¡û
>W131192939 ASNH01000025 Unclassified Cloacimonetes bacterium SCGC AAA255-C20 KSB1 bacterium SCGC AAA255-C20 [ASNH] 6854 6939 + Ser TGA [ENA] ¡û
>W131192984 ASNI01000022 Unclassified Cloacimonetes bacterium SCGC AAA252-N17 KSB1 bacterium SCGC AAA252-N17 [ASNI] 8776 8691 - Ser TGA [ENA] ¡û
>W131193058 ASNM01000043 Unclassified Cloacimonetes bacterium SCGC AAA252-G08 KSB1 bacterium SCGC AAA252-G08 [ASNM] 13224 13309 + Ser TGA [ENA] ¡û
>W131193140 ASNQ01000022 Unclassified Cloacimonetes bacterium SCGC AAA252-K16 KSB1 bacterium SCGC AAA252-K16 [ASNQ] 9424 9339 - Ser TGA [ENA] ¡û
>W131193197 ASNT01000035 Unclassified Cloacimonetes bacterium SCGC AAA252-P10 KSB1 bacterium SCGC AAA252-P10 [ASNT] 16869 16954 + Ser TGA [ENA] ¡û
>W141139673 AWNX01000008 Unclassified Cloacimonetes bacterium JGI OTU-1 [AWNX] 4729 4644 - Ser TGA [ENA] ¡û
>WENV170600993 FUWD010151907 [FUWD] metagenome; unknown 814 729 - Ser TGA [ENA] ¢þ
>WENV170625242 FUWD013193950 [FUWD] metagenome; unknown 5080 4995 - Ser TGA [ENA] ¢þ
>WENV170625246 FUWD013193951 [FUWD] metagenome; unknown 143 58 - Ser TGA [ENA] ¢þ
>WENV170633487 FUWD013396907 [FUWD] metagenome; unknown 5080 4995 - Ser TGA [ENA] ¢þ
>WENV170633491 FUWD013396908 [FUWD] metagenome; unknown 143 58 - Ser TGA [ENA] ¢þ
>SRA1025629 SRR035085.53463 454 Sequencing (SRP001806) 36 121 + Ser TGA [SRA]
>SRA1026167 SRR035085.157123 454 Sequencing (SRP001806) 201 286 + Ser TGA [SRA]
>SRA1030331 SRR035087.264545 454 Sequencing (SRP001808) 340 255 - Ser TGA [SRA]
>SRA1031462 SRR035087.433744 454 Sequencing (SRP001808) 296 211 - Ser TGA [SRA]
>SRA1032098 SRR035087.552143 454 Sequencing (SRP001808) 188 273 + Ser TGA [SRA]
>SRA1032864 SRR035088.118836 454 Sequencing (SRP001809) 483 398 - Ser TGA [SRA]
>SRA1033581 SRR035088.293464 454 Sequencing (SRP001809) 172 257 + Ser TGA [SRA]
>SRA1033713 SRR035088.334285 454 Sequencing (SRP001809) 44 129 + Ser TGA [SRA]
>SRA1033776 SRR035088.351273 454 Sequencing (SRP001809) 278 363 + Ser TGA [SRA]
>SRA1050209 SRR035095.212599 454 Sequencing (SRP001816) 101 16 - Ser TGA [SRA]
Identical group No.153853 (77 seq.)
>C005323 CP000108 Chlorobiota Chlorobium chlorochromatii [CP000108] 570415 570333 - Ser TGA [Ensembl] ¡û
>C018270 CP000607 Chlorobiota Chlorobium phaeovibrioides [CP000607] 1190073 1189991 - Ser TGA [Ensembl] ¡û
>WENV170613664 FUWD012815692 [FUWD] metagenome; unknown 1122 1205 + Ser TGA [ENA] ¢þ
>W09103366 AAJD01000012 Chlorobiota Chlorobium phaeovibrioides DSM 265 [AAJD] 2592 2509 - Ser TGA [ENA] ¡û
>SRA1018543 SRR035082.307913 454 Sequencing (SRP001803) 111 28 - Ser TGA [SRA]
>SRA1020077 SRR035083.54387 454 Sequencing (SRP001804) 93 10 - Ser TGA [SRA]
>SRA1020315 SRR035083.95829 454 Sequencing (SRP001804) 42 125 + Ser TGA [SRA]
>SRA1020333 SRR035083.98303 454 Sequencing (SRP001804) 208 125 - Ser TGA [SRA]
>SRA1020420 SRR035083.112053 454 Sequencing (SRP001804) 91 8 - Ser TGA [SRA]
>SRA1020511 SRR035083.127693 454 Sequencing (SRP001804) 206 123 - Ser TGA [SRA]
>SRA1020618 SRR035083.141439 454 Sequencing (SRP001804) 42 125 + Ser TGA [SRA]
>SRA1020676 SRR035083.151027 454 Sequencing (SRP001804) 113 196 + Ser TGA [SRA]
>SRA1020731 SRR035083.156910 454 Sequencing (SRP001804) 260 343 + Ser TGA [SRA]
>SRA1021004 SRR035083.196152 454 Sequencing (SRP001804) 246 329 + Ser TGA [SRA]
>SRA1021133 SRR035083.213223 454 Sequencing (SRP001804) 170 253 + Ser TGA [SRA]
>SRA1021195 SRR035083.222248 454 Sequencing (SRP001804) 43 126 + Ser TGA [SRA]
>SRA1021243 SRR035083.227941 454 Sequencing (SRP001804) 239 156 - Ser TGA [SRA]
>SRA1021245 SRR035083.228190 454 Sequencing (SRP001804) 92 175 + Ser TGA [SRA]
>SRA1021287 SRR035083.237016 454 Sequencing (SRP001804) 239 156 - Ser TGA [SRA]
>SRA1021498 SRR035083.266198 454 Sequencing (SRP001804) 206 123 - Ser TGA [SRA]
>SRA1021580 SRR035083.275748 454 Sequencing (SRP001804) 371 454 + Ser TGA [SRA]
>SRA1021664 SRR035083.290010 454 Sequencing (SRP001804) 136 53 - Ser TGA [SRA]
>SRA1021811 SRR035083.312690 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1021853 SRR035083.317812 454 Sequencing (SRP001804) 124 41 - Ser TGA [SRA]
>SRA1021885 SRR035083.324145 454 Sequencing (SRP001804) 104 187 + Ser TGA [SRA]
>SRA1021935 SRR035083.329251 454 Sequencing (SRP001804) 135 218 + Ser TGA [SRA]
>SRA1021953 SRR035083.331676 454 Sequencing (SRP001804) 239 156 - Ser TGA [SRA]
>SRA1022037 SRR035083.342775 454 Sequencing (SRP001804) 115 32 - Ser TGA [SRA]
>SRA1022083 SRR035083.349811 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022184 SRR035083.365110 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022230 SRR035083.371262 454 Sequencing (SRP001804) 41 124 + Ser TGA [SRA]
>SRA1022247 SRR035083.374137 454 Sequencing (SRP001804) 155 72 - Ser TGA [SRA]
>SRA1022321 SRR035083.389183 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022504 SRR035083.415272 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022507 SRR035083.415663 454 Sequencing (SRP001804) 124 41 - Ser TGA [SRA]
>SRA1022531 SRR035083.421688 454 Sequencing (SRP001804) 36 119 + Ser TGA [SRA]
>SRA1022563 SRR035083.424735 454 Sequencing (SRP001804) 79 162 + Ser TGA [SRA]
>SRA1022589 SRR035083.429299 454 Sequencing (SRP001804) 128 45 - Ser TGA [SRA]
>SRA1022791 SRR035083.461356 454 Sequencing (SRP001804) 14 97 + Ser TGA [SRA]
>SRA1022867 SRR035083.476091 454 Sequencing (SRP001804) 173 256 + Ser TGA [SRA]
>SRA1022892 SRR035083.480011 454 Sequencing (SRP001804) 36 119 + Ser TGA [SRA]
>SRA1022944 SRR035083.492741 454 Sequencing (SRP001804) 72 155 + Ser TGA [SRA]
>SRA1022973 SRR035083.498861 454 Sequencing (SRP001804) 127 44 - Ser TGA [SRA]
>SRA1026023 SRR035085.128543 454 Sequencing (SRP001806) 163 80 - Ser TGA [SRA]
>SRA1028909 SRR035087.36046 454 Sequencing (SRP001808) 93 10 - Ser TGA [SRA]
>SRA1029881 SRR035087.195688 454 Sequencing (SRP001808) 94 11 - Ser TGA [SRA]
>SRA1031977 SRR035087.524255 454 Sequencing (SRP001808) 356 273 - Ser TGA [SRA]
>SRA1033692 SRR035088.326312 454 Sequencing (SRP001809) 119 202 + Ser TGA [SRA]
>SRA1033916 SRR035088.405934 454 Sequencing (SRP001809) 197 280 + Ser TGA [SRA]
>SRA1035845 SRR035089.387519 454 Sequencing (SRP001810) 395 478 + Ser TGA [SRA]
>SRA1036833 SRR035090.20100 454 Sequencing (SRP001811) 72 155 + Ser TGA [SRA]
>SRA1036871 SRR035090.29678 454 Sequencing (SRP001811) 414 497 + Ser TGA [SRA]
>SRA1037178 SRR035090.88136 454 Sequencing (SRP001811) 61 144 + Ser TGA [SRA]
>SRA1037469 SRR035090.138329 454 Sequencing (SRP001811) 75 158 + Ser TGA [SRA]
>SRA1037492 SRR035090.142333 454 Sequencing (SRP001811) 422 505 + Ser TGA [SRA]
>SRA1037640 SRR035090.166947 454 Sequencing (SRP001811) 69 152 + Ser TGA [SRA]
>SRA1037652 SRR035090.169756 454 Sequencing (SRP001811) 69 152 + Ser TGA [SRA]
>SRA1037815 SRR035090.200872 454 Sequencing (SRP001811) 244 161 - Ser TGA [SRA]
>SRA1038053 SRR035090.239510 454 Sequencing (SRP001811) 71 154 + Ser TGA [SRA]
>SRA1038060 SRR035090.240978 454 Sequencing (SRP001811) 125 42 - Ser TGA [SRA]
>SRA1038213 SRR035090.266097 454 Sequencing (SRP001811) 156 73 - Ser TGA [SRA]
>SRA1038258 SRR035090.275257 454 Sequencing (SRP001811) 147 64 - Ser TGA [SRA]
>SRA1038477 SRR035090.313059 454 Sequencing (SRP001811) 312 395 + Ser TGA [SRA]
>SRA1038596 SRR035090.333358 454 Sequencing (SRP001811) 69 152 + Ser TGA [SRA]
>SRA1038802 SRR035090.369478 454 Sequencing (SRP001811) 291 374 + Ser TGA [SRA]
>SRA1038808 SRR035090.370924 454 Sequencing (SRP001811) 170 253 + Ser TGA [SRA]
>SRA1038858 SRR035090.381487 454 Sequencing (SRP001811) 170 253 + Ser TGA [SRA]
>SRA1038898 SRR035090.390712 454 Sequencing (SRP001811) 55 138 + Ser TGA [SRA]
>SRA1039449 SRR035090.494821 454 Sequencing (SRP001811) 40 123 + Ser TGA [SRA]
>SRA1039456 SRR035090.496129 454 Sequencing (SRP001811) 61 144 + Ser TGA [SRA]
>SRA1039519 SRR035090.507904 454 Sequencing (SRP001811) 10 93 + Ser TGA [SRA]
>SRA1039786 SRR035090.568998 454 Sequencing (SRP001811) 350 433 + Ser TGA [SRA]
>SRA1045644 SRR035093.140663 454 Sequencing (SRP001814) 150 67 - Ser TGA [SRA]
>SRA1050563 SRR035095.293448 454 Sequencing (SRP001816) 193 276 + Ser TGA [SRA]
>SRA1054167 SRR035099.74429 454 Sequencing (SRP001820) 423 340 - Ser TGA [SRA]
>SRA1054198 SRR035099.81380 454 Sequencing (SRP001820) 423 340 - Ser TGA [SRA]
>SRA1054236 SRR035099.90380 454 Sequencing (SRP001820) 152 69 - Ser TGA [SRA]
Select
 Sequence ID Genome ID
(or Accession No.)		 Phylum/Class
(Sample source for ENV)		 Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK