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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183739769
PJUF01000007
269853
Actinomycetota
CTC
Glu
>WENV183739768
PJUF01000007
338297
Actinomycetota
CTG
Gln
>WENV183739804
PJUF01000018
162442
Actinomycetota
GAT
Ile
>WENV183739828
PJUF01000024
82645
Actinomycetota
GAG
Leu
>WENV183739836
PJUF01000026
412879
Actinomycetota
TCC
Gly
>WENV183739853
PJUF01000030
50066
Actinomycetota
GGA
Ser
>WENV183739864
PJUF01000034
340609
Actinomycetota
GCC
Gly
>WENV183739867
PJUF01000034
347986
Actinomycetota
CAC
Val
>WENV183739863
PJUF01000034
193267
Actinomycetota
CAA
Leu
>WENV183739886
PJUF01000043
251199
Actinomycetota
TTT
Lys
>WENV183739903
PJUF01000058
243493
Actinomycetota
CCT
Arg
>WENV183740015
PJUF01000142
412084
Actinomycetota
CCC
Gly
>WENV183740128
PJUF01000407
237588
Actinomycetota
TGT
Thr
>WENV183740384
PJUF01001585
401680
Actinomycetota
CTG
Gln
>WENV183740446
PJUF01002242
45831
Actinomycetota
TGA
Ser
>WENV183740447
PJUF01002242
12308
Actinomycetota
GCT
Ser
>WENV183740458
PJUF01002353
95931
Actinomycetota
GTA
Tyr
>WENV183740467
PJUF01002400
392804
Actinomycetota
TTG
Gln
>WENV183740548
PJUF01003355
148837
Actinomycetota
CAT
Met
>WENV183740586
PJUF01003849
105043
Actinomycetota
TAG
Leu
>WENV183740629
PJUF01004663
237499
Actinomycetota
GTT
Asn
>WENV183740673
PJUF01006055
16376
Actinomycetota
CGA
Ser
>WENV183740681
PJUF01006280
237513
Actinomycetota
ACG
Arg
>WENV183740797
PJUF01010841
179547
Actinomycetota
GGG
Pro
>WENV183741038
PJUF01030717
254605
Actinomycetota
TAA
Leu
>WENV183741106
PJUF01041569
340609
Actinomycetota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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