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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183725279
PJQE01221826
381781
Alphaproteobacteria
CAC
Val
>WENV183724213
PJQE01001616
339149
Alphaproteobacteria
GTT
Asn
>WENV183724417
PJQE01012722
412798
Alphaproteobacteria
CTG
Gln
>WENV183724231
PJQE01002557
299458
Alphaproteobacteria
CTT
Lys
>WENV183725008
PJQE01122893
27392
Alphaproteobacteria
GGA
Ser
>WENV183724250
PJQE01003513
146864
Alphaproteobacteria
TGG
Pro
>WENV183724658
PJQE01042062
412917
Alphaproteobacteria
TCC
Gly
>WENV183724518
PJQE01025322
375044
Alphaproteobacteria
GCC
Gly
>WENV183724720
PJQE01055083
352247
Alphaproteobacteria
TTG
Gln
>WENV183724256
PJQE01003795
345452
Alphaproteobacteria
GAC
Val
>WENV183725125
PJQE01160243
282595
Alphaproteobacteria
CCA
Trp
>WENV183724302
PJQE01005749
146683
Alphaproteobacteria
GTG
His
>WENV183724407
PJQE01012125
368245
Alphaproteobacteria
>WENV183724966
PJQE01111193
199865
Alphaproteobacteria
CAT
Met
>WENV183724998
PJQE01119858
342732
Alphaproteobacteria
CCC
Gly
>WENV183724349
PJQE01008403
236134
Alphaproteobacteria
TAC
Val
>WENV183724253
PJQE01003692
146858
Alphaproteobacteria
TCT
Arg
>WENV183724212
PJQE01001616
412154
Alphaproteobacteria
GCA
Cys
>WENV183724704
PJQE01052050
148300
Alphaproteobacteria
CCA
Trp
>WENV183724254
PJQE01003733
146854
Alphaproteobacteria
CCT
Arg
>WENV183724551
PJQE01027596
150578
Alphaproteobacteria
TCG
Arg
>WENV183724344
PJQE01008314
95923
Alphaproteobacteria
TAG
Leu
>WENV183725079
PJQE01145982
148429
Alphaproteobacteria
CCT
Arg
>WENV183724303
PJQE01005820
95924
Alphaproteobacteria
GAG
Leu
>WENV183724363
PJQE01009496
59118
Alphaproteobacteria
CAG
Leu
>WENV183724234
PJQE01002829
381718
Alphaproteobacteria
CCC
Gly
>WENV183724201
PJQE01001086
339305
Alphaproteobacteria
GGT
Thr
>WENV183725062
PJQE01142876
237281
Alphaproteobacteria
CGT
Thr
>WENV183724473
PJQE01019235
338622
Alphaproteobacteria
GTT
Asn
>WENV183724227
PJQE01002186
339465
Alphaproteobacteria
GGT
Thr
>WENV183724352
PJQE01008702
237479
Alphaproteobacteria
TTT
Lys
>WENV183724616
PJQE01035729
23611
Alphaproteobacteria
CGA
Ser
>WENV183724375
PJQE01010672
412153
Alphaproteobacteria
CTG
Gln
>WENV183724157
PJQE01000539
339464
Alphaproteobacteria
GCC
Gly
>WENV183724815
PJQE01073269
339639
Alphaproteobacteria
TTG
Gln
>WENV183724411
PJQE01012232
95925
Alphaproteobacteria
CAA
Leu
>WENV183724209
PJQE01001515
237474
Alphaproteobacteria
CCA
Trp
>WENV183724144
PJQE01000364
146852
Alphaproteobacteria
GTC
Asp
>WENV183724145
PJQE01000372
259072
Alphaproteobacteria
CGC
Ala
>WENV183724257
PJQE01003916
25738
Alphaproteobacteria
TGA
Ser
>WENV183724169
PJQE01000716
146851
Alphaproteobacteria
TAC
Val
>WENV183724308
PJQE01006001
345469
Alphaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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