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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183731507
PJTT01000012
266516
Alphaproteobacteria
TAC
Val
>WENV183731725
PJTT01000124
96238
Alphaproteobacteria
GAG
Leu
>WENV183731498
PJTT01000009
412798
Alphaproteobacteria
CTG
Gln
>WENV183731553
PJTT01000020
412798
Alphaproteobacteria
CTG
Gln
>WENV183731469
PJTT01000006
237489
Alphaproteobacteria
CAT
Met
>WENV183731570
PJTT01000028
237489
Alphaproteobacteria
CAT
Met
>WENV183731835
PJTT01000231
267922
Alphaproteobacteria
CCA
Trp
>WENV183731858
PJTT01000272
241021
Alphaproteobacteria
GGC
Ala
>WENV183731859
PJTT01000272
241021
Alphaproteobacteria
GGC
Ala
>WENV183731589
PJTT01000038
375044
Alphaproteobacteria
GCC
Gly
>WENV183731488
PJTT01000008
375044
Alphaproteobacteria
GCC
Gly
>WENV183731556
PJTT01000022
237867
Alphaproteobacteria
TTT
Lys
>WENV183731491
PJTT01000009
256971
Alphaproteobacteria
TGT
Thr
>WENV183731486
PJTT01000008
7609
Alphaproteobacteria
GCT
Ser
>WENV183731470
PJTT01000006
165860
Alphaproteobacteria
TGG
Pro
>WENV183731566
PJTT01000028
162801
Alphaproteobacteria
GTG
His
>WENV183731473
PJTT01000006
377852
Alphaproteobacteria
TGT
Thr
>WENV183731465
PJTT01000006
82652
Alphaproteobacteria
GTA
Tyr
>WENV183731840
PJTT01000237
339457
Alphaproteobacteria
>WENV183731729
PJTT01000124
339495
Alphaproteobacteria
>WENV183731569
PJTT01000028
151733
Alphaproteobacteria
GGG
Pro
>WENV183731503
PJTT01000012
97145
Alphaproteobacteria
TAG
Leu
>WENV183731464
PJTT01000006
25732
Alphaproteobacteria
CGA
Ser
>WENV183731630
PJTT01000071
338274
Alphaproteobacteria
TAC
Val
>WENV183731649
PJTT01000080
237281
Alphaproteobacteria
CGT
Thr
>WENV183731496
PJTT01000009
237281
Alphaproteobacteria
CGT
Thr
>WENV183731508
PJTT01000012
148854
Alphaproteobacteria
GTC
Asp
>WENV183731468
PJTT01000006
152510
Alphaproteobacteria
GGG
Pro
>WENV183731597
PJTT01000050
338622
Alphaproteobacteria
GTT
Asn
>WENV183731435
PJTT01000002
338622
Alphaproteobacteria
GTT
Asn
>WENV183731590
PJTT01000038
187569
Alphaproteobacteria
CCG
Arg
>WENV183731482
PJTT01000008
187569
Alphaproteobacteria
CCG
Arg
>WENV183731784
PJTT01000178
369678
Alphaproteobacteria
GGT
Thr
>WENV183731489
PJTT01000008
369678
Alphaproteobacteria
GGT
Thr
>WENV183731808
PJTT01000200
428521
Alphaproteobacteria
CTG
Gln
>WENV183731460
PJTT01000005
237579
Alphaproteobacteria
CTT
Lys
>WENV183731555
PJTT01000022
62052
Alphaproteobacteria
GAG
Leu
>WENV183731487
PJTT01000008
62052
Alphaproteobacteria
GAG
Leu
>WENV183731795
PJTT01000187
147013
Alphaproteobacteria
TCT
Arg
>WENV183731785
PJTT01000178
426627
Alphaproteobacteria
TCC
Gly
>WENV183731490
PJTT01000008
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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