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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183736509
PJUC01007478
339360
Alphaproteobacteria
>WENV183736679
PJUC01039610
96640
Alphaproteobacteria
CAA
Leu
>WENV183736320
PJUC01000696
96322
Alphaproteobacteria
CAA
Leu
>WENV183736268
PJUC01000369
96322
Alphaproteobacteria
CAA
Leu
>WENV183736434
PJUC01003366
382584
Alphaproteobacteria
CAC
Val
>WENV183736622
PJUC01025823
340310
Alphaproteobacteria
CAC
Val
>WENV183736673
PJUC01038784
59373
Alphaproteobacteria
CAG
Leu
>WENV183736419
PJUC01002771
235847
Alphaproteobacteria
CAT
Met
>WENV183736336
PJUC01000859
338496
Alphaproteobacteria
CAT
Met
>WENV183736608
PJUC01022452
237474
Alphaproteobacteria
CCA
Trp
>WENV183736491
PJUC01006873
152219
Alphaproteobacteria
CCG
Arg
>WENV183736647
PJUC01034051
146854
Alphaproteobacteria
CCT
Arg
>WENV183736360
PJUC01001094
152220
Alphaproteobacteria
CCT
Arg
>WENV183736363
PJUC01001175
23427
Alphaproteobacteria
CGA
Ser
>WENV183736352
PJUC01001004
235844
Alphaproteobacteria
CGC
Ala
>WENV183736348
PJUC01000969
338523
Alphaproteobacteria
CGT
Thr
>WENV183736609
PJUC01022660
247224
Alphaproteobacteria
CGT
Thr
>WENV183736366
PJUC01001203
412459
Alphaproteobacteria
CTG
Gln
>WENV183736669
PJUC01038307
237391
Alphaproteobacteria
GAA
Phe
>WENV183736637
PJUC01027839
164825
Alphaproteobacteria
GAT
Ile
>WENV183736634
PJUC01027483
188632
Alphaproteobacteria
GAT
Ile
>WENV183736597
PJUC01019328
188632
Alphaproteobacteria
GAT
Ile
>WENV183736341
PJUC01000917
411726
Alphaproteobacteria
GCA
Cys
>WENV183736424
PJUC01002921
152444
Alphaproteobacteria
GGG
Pro
>WENV183736333
PJUC01000846
235839
Alphaproteobacteria
GTG
His
>WENV183736342
PJUC01000917
235841
Alphaproteobacteria
GTT
Asn
>WENV183736294
PJUC01000451
235841
Alphaproteobacteria
GTT
Asn
>WENV183736587
PJUC01018101
300133
Alphaproteobacteria
TAC
Val
>WENV183736362
PJUC01001125
96930
Alphaproteobacteria
TAG
Leu
>WENV183736564
PJUC01013515
166801
Alphaproteobacteria
TCG
Arg
>WENV183736422
PJUC01002838
152218
Alphaproteobacteria
TCT
Arg
>WENV183736546
PJUC01011570
146858
Alphaproteobacteria
TCT
Arg
>WENV183736606
PJUC01022077
146864
Alphaproteobacteria
TGG
Pro
>WENV183736421
PJUC01002838
126683
Alphaproteobacteria
TGG
Pro
>WENV183736349
PJUC01000981
243303
Alphaproteobacteria
TGT
Thr
>WENV183736535
PJUC01010238
345469
Alphaproteobacteria
TGT
Thr
>WENV183736443
PJUC01003694
243304
Alphaproteobacteria
TTC
Glu
>WENV183736384
PJUC01001664
243304
Alphaproteobacteria
TTC
Glu
>WENV183736420
PJUC01002838
238730
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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