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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183744455
PJUK01033172
300133
Alphaproteobacteria
TAC
Val
>WENV183744424
PJUK01023465
146903
Alphaproteobacteria
CCT
Arg
>WENV183744397
PJUK01016421
303708
Alphaproteobacteria
TGC
Ala
>WENV183744317
PJUK01006850
148306
Alphaproteobacteria
GTG
His
>WENV183744096
PJUK01000406
145498
Alphaproteobacteria
TGG
Pro
>WENV183744365
PJUK01012071
339454
Alphaproteobacteria
>WENV183744230
PJUK01002540
339457
Alphaproteobacteria
>WENV183744362
PJUK01011899
253273
Alphaproteobacteria
CTT
Lys
>WENV183744459
PJUK01034309
387089
Alphaproteobacteria
TTC
Glu
>WENV183744461
PJUK01034362
29390
Alphaproteobacteria
CGA
Ser
>WENV183744212
PJUK01002011
145497
Alphaproteobacteria
GTG
His
>WENV183744309
PJUK01006387
23554
Alphaproteobacteria
TGA
Ser
>WENV183744219
PJUK01002198
338274
Alphaproteobacteria
TAC
Val
>WENV183744077
PJUK01000336
338274
Alphaproteobacteria
TAC
Val
>WENV183744173
PJUK01001217
237281
Alphaproteobacteria
CGT
Thr
>WENV183744401
PJUK01017130
95936
Alphaproteobacteria
TAA
Leu
>WENV183744220
PJUK01002259
339306
Alphaproteobacteria
>WENV183744409
PJUK01019112
369678
Alphaproteobacteria
GGT
Thr
>WENV183744452
PJUK01031882
144969
Alphaproteobacteria
CGG
Pro
>WENV183744337
PJUK01008678
95631
Alphaproteobacteria
TAG
Leu
>WENV183744121
PJUK01000608
345469
Alphaproteobacteria
TGT
Thr
>WENV183744003
PJUK01000118
147013
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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