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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170016473
AZIK01007851
273797
Alphaproteobacteria
GGG
Pro
>WENV170016491
AZIK01009764
780326
Alphaproteobacteria
CCC
Gly
>WENV170016444
AZIK01005588
780486
Alphaproteobacteria
TCC
Gly
>WENV170016439
AZIK01005350
46237
Alphaproteobacteria
TGA
Ser
>WENV170016532
AZIK01012088
273554
Alphaproteobacteria
CCG
Arg
>WENV170016502
AZIK01010832
291540
Alphaproteobacteria
TGG
Pro
>WENV170016449
AZIK01006004
653538
Alphaproteobacteria
TTC
Glu
>WENV170016385
AZIK01002089
655171
Alphaproteobacteria
GGT
Thr
>WENV170016430
AZIK01004577
655171
Alphaproteobacteria
GGT
Thr
>WENV170016484
AZIK01009007
456891
Alphaproteobacteria
CGT
Thr
>WENV170016461
AZIK01006457
451742
Alphaproteobacteria
GGC
Ala
>WENV170016415
AZIK01004026
653532
Alphaproteobacteria
GTT
Asn
>WENV170016414
AZIK01004026
274131
Alphaproteobacteria
CAT
Met
>WENV170016464
AZIK01006775
455362
Alphaproteobacteria
TTT
Lys
>WENV170016356
AZIK01000808
655358
Alphaproteobacteria
TTG
Gln
>WENV170016481
AZIK01008542
655358
Alphaproteobacteria
TTG
Gln
>WENV170016463
AZIK01006728
275155
Alphaproteobacteria
GGG
Pro
>WENV170016455
AZIK01006288
655166
Alphaproteobacteria
CAC
Val
>WENV170016508
AZIK01011228
655166
Alphaproteobacteria
CAC
Val
>WENV170016447
AZIK01005871
270796
Alphaproteobacteria
GTC
Asp
>WENV170016448
AZIK01005871
270796
Alphaproteobacteria
GTC
Asp
>WENV170016435
AZIK01004994
112802
Alphaproteobacteria
GAG
Leu
>WENV170016489
AZIK01009599
454914
Alphaproteobacteria
TTT
Lys
>WENV170016440
AZIK01005366
46069
Alphaproteobacteria
GGA
Ser
>WENV170016490
AZIK01009672
274130
Alphaproteobacteria
CGG
Pro
>WENV170016391
AZIK01002650
274130
Alphaproteobacteria
CGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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