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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170574064
FLYM01003052
452757
Alphaproteobacteria
CAT
Met
>WENV170574066
FLYM01003141
782892
Alphaproteobacteria
TTG
Gln
>WENV170574126
FLYM01008387
116949
Alphaproteobacteria
CAG
Leu
>WENV170574239
FLYM01016565
653942
Alphaproteobacteria
TTG
Gln
>WENV170574250
FLYM01017868
454430
Alphaproteobacteria
CGC
Ala
>WENV170574278
FLYM01020563
779636
Alphaproteobacteria
CTG
Gln
>WENV170574299
FLYM01024174
48680
Alphaproteobacteria
GGA
Ser
>WENV170574331
FLYM01026500
288848
Alphaproteobacteria
TTT
Lys
>WENV170574341
FLYM01027091
654915
Alphaproteobacteria
GCC
Gly
>WENV170574364
FLYM01029701
780104
Alphaproteobacteria
TTG
Gln
>WENV170574367
FLYM01029920
454433
Alphaproteobacteria
TGT
Thr
>WENV170574410
FLYM01035073
671377
Alphaproteobacteria
GGT
Thr
>WENV170574422
FLYM01036230
654913
Alphaproteobacteria
GTT
Asn
>WENV170574457
FLYM01040619
654915
Alphaproteobacteria
GCC
Gly
>WENV170574471
FLYM01043099
465413
Alphaproteobacteria
TGC
Ala
>WENV170574472
FLYM01043101
654915
Alphaproteobacteria
GCC
Gly
>WENV170574484
FLYM01045498
656305
Alphaproteobacteria
CAC
Val
>WENV170574494
FLYM01047467
654998
Alphaproteobacteria
GCC
Gly
>WENV170574521
FLYM01052359
454180
Alphaproteobacteria
CGT
Thr
>WENV170574542
FLYM01056187
454429
Alphaproteobacteria
CTT
Lys
>WENV170574552
FLYM01058004
454430
Alphaproteobacteria
CGC
Ala
>WENV170574562
FLYM01060303
782892
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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