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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180032704
FTKD01000020
271596
Betaproteobacteria
GAT
Ile
>WENV180032705
FTKD01000020
452924
Betaproteobacteria
TGC
Ala
>WENV180032716
FTKD01000071
283585
Betaproteobacteria
CAT
Met
>WENV180032720
FTKD01000118
464315
Betaproteobacteria
GTT
Asn
>WENV180032763
FTKD01000495
464315
Betaproteobacteria
GTT
Asn
>WENV180032782
FTKD01000836
283585
Betaproteobacteria
CAT
Met
>WENV180032815
FTKD01001348
463660
Betaproteobacteria
CCA
Trp
>WENV180032823
FTKD01001486
465524
Betaproteobacteria
TGC
Ala
>WENV180032826
FTKD01001490
282077
Betaproteobacteria
TTG
Gln
>WENV180032843
FTKD01001697
271596
Betaproteobacteria
GAT
Ile
>WENV180032844
FTKD01001697
452924
Betaproteobacteria
TGC
Ala
>WENV180032847
FTKD01002117
273289
Betaproteobacteria
CAT
Met
>WENV180032873
FTKD01002402
452202
Betaproteobacteria
TAC
Val
>WENV180032876
FTKD01002429
780079
Betaproteobacteria
TCC
Gly
>WENV180032877
FTKD01002429
655859
Betaproteobacteria
GGT
Thr
>WENV180032923
FTKD01004889
283585
Betaproteobacteria
CAT
Met
>WENV180032983
FTKD01020914
283584
Betaproteobacteria
CAT
Met
>WENV180032985
FTKD01022022
465524
Betaproteobacteria
TGC
Ala
>WENV180032996
FTKD01029315
463660
Betaproteobacteria
CCA
Trp
>WENV180032997
FTKD01030331
282077
Betaproteobacteria
TTG
Gln
>WENV180032998
FTKD01030331
283584
Betaproteobacteria
CAT
Met
>WENV180033022
FTKD01064333
282077
Betaproteobacteria
TTG
Gln
>WENV180033109
FTKD01402781
656419
Betaproteobacteria
CCT
Arg
>WENV180033121
FTKD01411761
271596
Betaproteobacteria
GAT
Ile
>WENV180033122
FTKD01411761
452924
Betaproteobacteria
TGC
Ala
>WENV180033123
FTKD01411761
456398
Betaproteobacteria
GAA
Phe
>WENV180033127
FTKD01411775
455932
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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