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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
87 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170618733
FUWD012983713
218220
Alphaproteobacteria
>WENV170601760
FUWD010192052
218119
Alphaproteobacteria
>WENV170605305
FUWD010469327
218119
Alphaproteobacteria
>WENV170610785
FUWD012053071
218119
Alphaproteobacteria
>WENV170623155
FUWD013138730
218119
Alphaproteobacteria
>WENV170631413
FUWD013351005
218119
Alphaproteobacteria
>WENV170605610
FUWD010516306
273805
Alphaproteobacteria
ACG
Arg
>WENV170602364
FUWD010231150
653533
Alphaproteobacteria
CAC
Val
>WENV170623300
FUWD013145222
113518
Alphaproteobacteria
CAG
Leu
>WENV170631562
FUWD013357194
113518
Alphaproteobacteria
CAG
Leu
>WENV170611045
FUWD012186839
113228
Alphaproteobacteria
CAG
Leu
>WENV170606702
FUWD010712650
270799
Alphaproteobacteria
CAT
Met
>WENV170606677
FUWD010707767
271956
Alphaproteobacteria
CAT
Met
>WENV170605471
FUWD010490736
275989
Alphaproteobacteria
CAT
Met
>WENV170626085
FUWD013213423
452884
Alphaproteobacteria
CCA
Trp
>WENV170597982
FUWD010021851
452884
Alphaproteobacteria
CCA
Trp
>WENV170608245
FUWD010907814
452894
Alphaproteobacteria
CCA
Trp
>WENV170606714
FUWD010716671
455995
Alphaproteobacteria
CCA
Trp
>WENV170605257
FUWD010462311
274223
Alphaproteobacteria
CCG
Arg
>WENV170608867
FUWD011136005
46070
Alphaproteobacteria
CGA
Ser
>WENV170611427
FUWD012304961
47685
Alphaproteobacteria
CGA
Ser
>WENV170604214
FUWD010374337
49776
Alphaproteobacteria
CGA
Ser
>WENV170608267
FUWD010910591
46034
Alphaproteobacteria
CGA
Ser
>WENV170608287
FUWD010913572
454489
Alphaproteobacteria
CGC
Ala
>WENV170602187
FUWD010220695
454510
Alphaproteobacteria
CGT
Thr
>WENV170599846
FUWD010094637
661003
Alphaproteobacteria
GAA
Phe
>WENV170622020
FUWD013084307
661003
Alphaproteobacteria
GAA
Phe
>WENV170630226
FUWD013299422
661003
Alphaproteobacteria
GAA
Phe
>WENV170605328
FUWD010473424
655359
Alphaproteobacteria
GAC
Val
>WENV170605686
FUWD010523808
671542
Alphaproteobacteria
GAC
Val
>WENV170629176
FUWD013263086
656140
Alphaproteobacteria
GAC
Val
>WENV170603442
FUWD010309256
656140
Alphaproteobacteria
GAC
Val
>WENV170607412
FUWD010817663
656140
Alphaproteobacteria
GAC
Val
>WENV170610958
FUWD012148291
656140
Alphaproteobacteria
GAC
Val
>WENV170621016
FUWD013046257
656140
Alphaproteobacteria
GAC
Val
>WENV170608337
FUWD010919584
659578
Alphaproteobacteria
GAC
Val
>WENV170603963
FUWD010348420
113204
Alphaproteobacteria
GAG
Leu
>WENV170598423
FUWD010034993
272172
Alphaproteobacteria
GAT
Ile
>WENV170613166
FUWD012784367
780126
Alphaproteobacteria
GCA
Cys
>WENV170609132
FUWD011286408
658326
Alphaproteobacteria
GCC
Gly
>WENV170603780
FUWD010334260
46072
Alphaproteobacteria
GCT
Ser
>WENV170625680
FUWD013203174
46222
Alphaproteobacteria
GGA
Ser
>WENV170633902
FUWD013405209
46222
Alphaproteobacteria
GGA
Ser
>WENV170613161
FUWD012783624
451742
Alphaproteobacteria
GGC
Ala
>WENV170613162
FUWD012783624
451742
Alphaproteobacteria
GGC
Ala
>WENV170613163
FUWD012783624
451742
Alphaproteobacteria
GGC
Ala
>WENV170610568
FUWD011949265
655363
Alphaproteobacteria
GGT
Thr
>WENV170606813
FUWD010737912
655271
Alphaproteobacteria
GGT
Thr
>WENV170602526
FUWD010242690
655271
Alphaproteobacteria
GGT
Thr
>WENV170610209
FUWD011758449
275828
Alphaproteobacteria
GTC
Asp
>WENV170603726
FUWD010331632
270796
Alphaproteobacteria
GTC
Asp
>WENV170605229
FUWD010460694
270796
Alphaproteobacteria
GTC
Asp
>WENV170610076
FUWD011666367
274127
Alphaproteobacteria
GTG
His
>WENV170603928
FUWD010346111
277700
Alphaproteobacteria
GTG
His
>WENV170619287
FUWD013008221
277700
Alphaproteobacteria
GTG
His
>WENV170603488
FUWD010312463
653532
Alphaproteobacteria
GTT
Asn
>WENV170603971
FUWD010348938
653532
Alphaproteobacteria
GTT
Asn
>WENV170605370
FUWD010478439
653532
Alphaproteobacteria
GTT
Asn
>WENV170607502
FUWD010827889
653532
Alphaproteobacteria
GTT
Asn
>WENV170620133
FUWD013026416
653532
Alphaproteobacteria
GTT
Asn
>WENV170628269
FUWD013244259
653532
Alphaproteobacteria
GTT
Asn
>WENV170603397
FUWD010307539
655394
Alphaproteobacteria
GTT
Asn
>WENV170613167
FUWD012784367
654523
Alphaproteobacteria
GTT
Asn
>WENV170623351
FUWD013147261
654523
Alphaproteobacteria
GTT
Asn
>WENV170631615
FUWD013358831
654523
Alphaproteobacteria
GTT
Asn
>WENV170610745
FUWD012034301
452917
Alphaproteobacteria
TAC
Val
>WENV170622367
FUWD013100139
180489
Alphaproteobacteria
TAG
Leu
>WENV170630587
FUWD013314569
180489
Alphaproteobacteria
TAG
Leu
>WENV170608413
FUWD010942231
180720
Alphaproteobacteria
TAG
Leu
>WENV170621159
FUWD013050632
782365
Alphaproteobacteria
TCC
Gly
>WENV170629326
FUWD013267257
782365
Alphaproteobacteria
TCC
Gly
>WENV170605814
FUWD010546397
780582
Alphaproteobacteria
TCC
Gly
>WENV170603740
FUWD010332399
780582
Alphaproteobacteria
TCC
Gly
>WENV170603181
FUWD010294175
780582
Alphaproteobacteria
TCC
Gly
>WENV170602256
FUWD010223537
780582
Alphaproteobacteria
TCC
Gly
>WENV170605875
FUWD010560072
780582
Alphaproteobacteria
TCC
Gly
>WENV170607354
FUWD010808696
780582
Alphaproteobacteria
TCC
Gly
>WENV170608687
FUWD011051432
780582
Alphaproteobacteria
TCC
Gly
>WENV170619213
FUWD013005084
780582
Alphaproteobacteria
TCC
Gly
>WENV170619214
FUWD013005085
780582
Alphaproteobacteria
TCC
Gly
>WENV170600030
FUWD010103372
452895
Alphaproteobacteria
TGC
Ala
>WENV170617935
FUWD012943973
452895
Alphaproteobacteria
TGC
Ala
>WENV170618120
FUWD012952530
452895
Alphaproteobacteria
TGC
Ala
>WENV170620411
FUWD013031172
275667
Alphaproteobacteria
TGG
Pro
>WENV170628553
FUWD013248704
275667
Alphaproteobacteria
TGG
Pro
>WENV170602602
FUWD010247190
655167
Alphaproteobacteria
TTC
Glu
>WENV170609042
FUWD011220241
454914
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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