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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170650437
JRYE01000344
655530
Betaproteobacteria
GGT
Thr
>WENV170650436
JRYE01000344
477700
Betaproteobacteria
GCC
Gly
>WENV170650455
JRYE01000859
455720
Betaproteobacteria
TGC
Ala
>WENV170650457
JRYE01000860
455720
Betaproteobacteria
TGC
Ala
>WENV170650467
JRYE01001143
477700
Betaproteobacteria
GCC
Gly
>WENV170650516
JRYE01001962
188476
Betaproteobacteria
CAG
Leu
>WENV170650622
JRYE01007078
455723
Betaproteobacteria
CTT
Lys
>WENV170650623
JRYE01007119
454902
Betaproteobacteria
CGC
Ala
>WENV170650682
JRYE01009771
182128
Betaproteobacteria
CAA
Leu
>WENV170650718
JRYE01013145
47219
Betaproteobacteria
CGA
Ser
>WENV170650719
JRYE01013145
274557
Betaproteobacteria
ACG
Arg
>WENV170650724
JRYE01013547
47219
Betaproteobacteria
CGA
Ser
>WENV170650725
JRYE01013547
274557
Betaproteobacteria
ACG
Arg
>WENV170650726
JRYE01013547
274557
Betaproteobacteria
ACG
Arg
>WENV170650759
JRYE01016617
274556
Betaproteobacteria
TCT
Arg
>WENV170650775
JRYE01018066
276754
Betaproteobacteria
CAT
Met
>WENV170650778
JRYE01018571
455720
Betaproteobacteria
TGC
Ala
>WENV170650780
JRYE01018572
455720
Betaproteobacteria
TGC
Ala
>WENV170650794
JRYE01021318
180620
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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